RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ZCWPW2Q504Y3 356 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 BTBD10Q9BSF8 475 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 SPATA16Q9BXB7 569 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 NMRAL1Q9HBL8 299 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ENTPD7Q9NQZ7 604 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ABCC13Q9NSE7 274 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 PEX5P50542 639 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 ATP11BQ9Y2G3 1177 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF284Q2VY69 593 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 TTC33Q6PID6 262 aaPredicted RBP17.93■□□□□ 0.46
PHRF1-205ENST00000533464 OTOAQ7RTW8 1153 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 PSTKQ8IV42 348 aaKnown RBP17.93■□□□□ 0.46
PHRF1-205ENST00000533464 CENPTQ96BT3 561 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 EMILIN2Q9BXX0 1053 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 MAGEA13PA6NCF6 341 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 PHGDHO43175 533 aaKnown RBP17.93■□□□□ 0.46
PHRF1-205ENST00000533464 SNX3O60493 162 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 BAIAP3O94812 1187 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 ZCCHC18P0CG32 403 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 HSPA13P48723 471 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 CLK2P49760 499 aaKnown RBP17.93■□□□□ 0.46
PHRF1-205ENST00000533464 KYAT3Q6YP21 454 aaKnown RBP17.93■□□□□ 0.46
PHRF1-205ENST00000533464 PRDM12Q9H4Q4 367 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 PRR23AA6NEV1 266 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 PLK1P53350 603 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 ATP6AP1LQ52LC2 224 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 SLC30A9Q6PML9 568 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 HSD3B7Q9H2F3 369 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
PHRF1-205ENST00000533464 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 SLC15A5A6NIM6 579 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-205ENST00000533464 KPNB1Q14974 876 aaKnown RBP17.92■□□□□ 0.46
PHRF1-205ENST00000533464 MSL3Q8N5Y2 521 aaKnown RBP17.92■□□□□ 0.46
PHRF1-205ENST00000533464 MARCH2Q9P0N8 246 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 MYL4P12829 197 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF23P17027 643 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 MED1Q15648 1581 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-205ENST00000533464 TMEM191CA6NGB0 347 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 FKBP6O75344 327 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 ITGB6P18564 788 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 CDK7P50613 346 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 NR6A1Q15406 480 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 LRRC8BQ6P9F7 803 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF467Q7Z7K2 595 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-205ENST00000533464 JOSD2Q8TAC2 188 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 ACTR8Q9H981 624 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 CDHR5Q9HBB8 845 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 CHRNB3Q05901 458 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 C11orf96Q7Z7L8 435 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 PRDM16Q9HAZ2 1276 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 TAS2R13Q9NYV9 303 aa17.92■□□□□ 0.46
PHRF1-205ENST00000533464 DCXO43602 365 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 MMP8P22894 467 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PRIM2P49643 509 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 NEPROQ6NW34 567 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ERVK-5Q9HDB9 667 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 APPL1Q9UKG1 709 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ACTL7BQ9Y614 415 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 GOT1P17174 413 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 MMP13P45452 471 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PPP1R26Q5T8A7 1209 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-205ENST00000533464 P3H2Q8IVL5 708 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF786Q8N393 782 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ACOX2Q99424 681 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 GPR20Q99678 358 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF670Q9BS34 389 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 IL22Q9GZX6 179 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 TPP1O14773 563 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 NAB1Q13506 487 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHRF1-205ENST00000533464 SDE2Q6IQ49 451 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 IZUMO2Q6UXV1 221 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PALB2Q86YC2 1186 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 FBXO39Q8N4B4 442 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 HELQQ8TDG4 1101 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 JADE3Q92613 823 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PPP1R10Q96QC0 940 aaKnown RBP17.91■□□□□ 0.46
PHRF1-205ENST00000533464 PDP2Q9P2J9 529 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ABHD2P08910 425 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 GRM5P41594 1212 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 SERPINB10P48595 397 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 CCDC15Q0P6D6 951 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 LBX2Q6XYB7 198 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 ITIH5Q86UX2 942 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 LPPQ93052 612 aa17.91■□□□□ 0.46
PHRF1-205ENST00000533464 MEI4A8MW99 385 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 HNRNPRO43390 633 aaKnown RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 MRPS6P82932 125 aaKnown RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 PTPN20Q4JDL3 420 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 EXOC3L1Q86VI1 746 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 IQCKQ8N0W5 287 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 C18orf25Q96B23 403 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 TTYH3Q9C0H2 523 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 VTI1BQ9UEU0 232 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms