RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 BTBD3Q9Y2F9 522 aa23.7■■□□□ 1.38
PKP3-210ENST00000533249 PCDHGB2Q9Y5G2 931 aa23.7■■□□□ 1.38
PKP3-210ENST00000533249 DMXL2Q8TDJ6 3036 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 PLXNB3Q9ULL4 1909 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 FAM47DPA6NHR8 397 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CAPNS1P04632 268 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 ATXN1LP0C7T5 689 aaKnown RBP23.69■■□□□ 1.38
PKP3-210ENST00000533249 CD27P26842 260 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 GRIA4P48058 902 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CDH18Q13634 790 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 SUZ12Q15022 739 aaKnown RBP23.69■■□□□ 1.38
PKP3-210ENST00000533249 TTI2Q6NXR4 508 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 DBX2Q6ZNG2 339 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 MMS22LQ6ZRQ5 1243 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CLEC17AQ6ZS10 378 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CCDC117Q8IWD4 279 aaPredicted RBP23.69■■□□□ 1.38
PKP3-210ENST00000533249 DHX40Q8IX18 779 aaKnown RBP23.69■■□□□ 1.38
PKP3-210ENST00000533249 CFAP52Q8N1V2 620 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 TTC17Q96AE7 1141 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CDC6Q99741 560 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 RSPH9Q9H1X1 276 aaPredicted RBP23.69■■□□□ 1.38
PKP3-210ENST00000533249 OSGEPQ9NPF4 335 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 NCKAP1Q9Y2A7 1128 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 TLR6Q9Y2C9 796 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 CABIN1Q9Y6J0 2220 aa23.69■■□□□ 1.38
PKP3-210ENST00000533249 P4HA2O15460 535 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 SIN3BO75182 1162 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 ASLP04424 464 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 PPP1R2P41236 205 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 GCNT1Q02742 428 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 MS4A13Q5J8X5 152 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 ADAT2Q7Z6V5 191 aaKnown RBP23.68■■□□□ 1.38
PKP3-210ENST00000533249 EHBP1Q8NDI1 1231 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 NELFBQ8WX92 580 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 KREMEN1Q96MU8 473 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 PABPC3Q9H361 631 aaKnown RBP23.68■■□□□ 1.38
PKP3-210ENST00000533249 FBXL12Q9NXK8 326 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 PTPRBP23467 1997 aa23.68■■□□□ 1.38
PKP3-210ENST00000533249 KRT5P13647 590 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 HOXB3P14651 431 aaPredicted RBP23.67■■□□□ 1.38
PKP3-210ENST00000533249 HNRNPA1L2Q32P51 320 aaKnown RBP23.67■■□□□ 1.38
PKP3-210ENST00000533249 FSCBQ5H9T9 825 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 KCNT1Q5JUK3 1230 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 KIAA0895LQ68EN5 471 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 DENND1BQ6P3S1 775 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 LRSAM1Q6UWE0 723 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 TAC4Q86UU9 113 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 SLC39A13Q96H72 371 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 MRGPRX3Q96LB0 322 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 CCDC86Q9H6F5 360 aaKnown RBP23.67■■□□□ 1.38
PKP3-210ENST00000533249 TOR4AQ9NXH8 423 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 KIAA1522Q9P206 1035 aaPredicted RBP23.67■■□□□ 1.38
PKP3-210ENST00000533249 SERGEFQ9UGK8 458 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 XPO7Q9UIA9 1087 aaKnown RBP23.67■■□□□ 1.38
PKP3-210ENST00000533249 CTNND2Q9UQB3 1225 aa23.67■■□□□ 1.38
PKP3-210ENST00000533249 ANKRD11Q6UB99 2663 aaPredicted RBP23.66■■□□□ 1.38
PKP3-210ENST00000533249 H0Y8X5 98 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 CAPN9O14815 690 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 SART1O43290 800 aaKnown RBP23.66■■□□□ 1.38
PKP3-210ENST00000533249 RNASEH1O60930 286 aaKnown RBP23.66■■□□□ 1.38
PKP3-210ENST00000533249 IGHV4-34P06331 123 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 CTSOP43234 321 aaPredicted RBP23.66■■□□□ 1.38
PKP3-210ENST00000533249 GPD2P43304 727 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 CCT8P50990 548 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 KCNH2Q12809 1159 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 NNTQ13423 1086 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 DCAF6Q58WW2 860 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 PITRM1Q5JRX3 1037 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 SYPL2Q5VXT5 272 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 USP30Q70CQ3 517 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 LGI2Q8N0V4 545 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 IGSF8Q969P0 613 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 ORAI3Q9BRQ5 295 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 SCML1Q9UN30 329 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 ERVW-1Q9UQF0 538 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 CEP83Q9Y592 693 aa23.66■■□□□ 1.38
PKP3-210ENST00000533249 PLXNA2O75051 1894 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 A0A1W2PP55 124 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 BICDL2A1A5D9 508 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 TTC34A8MYJ7 566 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 PPP1R3GB7ZBB8 358 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 MID1O15344 667 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 LUC7L3O95232 432 aaKnown RBP23.65■■□□□ 1.38
PKP3-210ENST00000533249 APOEP02649 317 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 BMP6P22004 513 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 ACADSBP45954 432 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 STX17P56962 302 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 IL9RQ01113 521 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 CST6Q15828 149 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 RAP1GAP2Q684P5 730 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 MMAAQ8IVH4 418 aaKnown RBP23.65■■□□□ 1.38
PKP3-210ENST00000533249 TRIM59Q8IWR1 403 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 MDM1Q8TC05 714 aa23.65■■□□□ 1.38
PKP3-210ENST00000533249 INTS2Q9H0H0 1204 aaKnown RBP23.65■■□□□ 1.38
PKP3-210ENST00000533249 DSPP15924 2871 aaKnown RBP23.65■■□□□ 1.38
PKP3-210ENST00000533249 BIN1O00499 593 aa23.64■■□□□ 1.37
PKP3-210ENST00000533249 RNASEH2AO75792 299 aaKnown RBP23.64■■□□□ 1.37
PKP3-210ENST00000533249 MOCS3O95396 460 aa23.64■■□□□ 1.37
PKP3-210ENST00000533249 CTSKP43235 329 aa23.64■■□□□ 1.37
PKP3-210ENST00000533249 RPL34P49207 117 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms