RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 SCYL2Q6P3W7 929 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 ANKS1BQ7Z6G8 1248 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 SLFN11Q7Z7L1 901 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 MFN1Q8IWA4 741 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CARNMT1Q8N4J0 409 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CCDC26Q8TAB7 109 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CTNNBL1Q8WYA6 563 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 OSBPL2Q9H1P3 480 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 ANAPC7Q9UJX3 599 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 FZD10Q9ULW2 581 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 STARD13Q9Y3M8 1113 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 MUC6Q6W4X9 2439 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 GOLGA6L3A6NEY3 463 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 H0Y626 953 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ATG13O75143 517 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 LRCH4O75427 683 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 RNF8O76064 485 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 PAPSS2O95340 614 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 PABPC1P11940 636 aaKnown RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 MIPP30301 263 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 TIE1P35590 1138 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CXCL12P48061 93 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CCR3P51677 355 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CDH4P55283 916 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 LMAN2Q12907 356 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CDH18Q13634 790 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ACAP1Q15027 740 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ALFQ53S48 1182 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 EGFLAMQ63HQ2 1017 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CXorf57Q6NSI4 855 aaKnown RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 LRRC31Q6UY01 552 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CYP4V2Q6ZWL3 525 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ADIPOR2Q86V24 386 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 TMTC1Q8IUR5 882 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 TMEM139Q8IV31 216 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 PYROXD2Q8N2H3 581 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CCDC33Q8N5R6 958 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ALLCQ8N6M5 410 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 WFIKKN2Q8TEU8 576 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 PEBP4Q96S96 227 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 PRRX2Q99811 253 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 KCNH6Q9H252 994 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ZDHHC4Q9NPG8 344 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 ELOVL2Q9NXB9 296 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 UVRAGQ9P2Y5 699 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 OR12D3Q9UGF7 316 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 IP6K2Q9UHH9 426 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 INTS6Q9UL03 887 aaKnown RBP12.36□□□□□ -0.43
SSBP3-214ENST00000533209 INTUQ9ULD6 942 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
SSBP3-214ENST00000533209 EIF3CLB5ME19 914 aaKnown RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 ADAM23O75077 832 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 CLDN11O75508 207 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 NDUFA10O95299 355 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 TDGF1P13385 188 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 HNRNPLP14866 589 aaKnown RBP eCLIP12.35□□□□□ -0.433e-24■■■■■ 36.5
SSBP3-214ENST00000533209 HOXC13P31276 330 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 PCK1P35558 622 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 AIF1P55008 147 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 TCF15Q12870 199 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 EIF4HQ15056 248 aaKnown RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 FUT11Q495W5 492 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 HSF5Q4G112 596 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 DAB2IPQ5VWQ8 1189 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 RAD9BQ6WBX8 426 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 CCDC117Q8IWD4 279 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 AHI1Q8N157 1196 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 TXNDC5Q8NBS9 432 aaKnown RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 OR52K2Q8NGK3 314 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 ACDQ96AP0 544 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms