RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ASLP04424 464 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 EPHX1P07099 455 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 PRKCHP24723 683 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 FOXK2Q01167 660 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 AASDHQ4L235 1098 aaPredicted RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 FNDC3BQ53EP0 1204 aaKnown RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 RABGAP1LQ5R372 815 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 FAM102AQ5T9C2 384 aaPredicted RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 SPECC1LQ69YQ0 1117 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 KIAA1324Q6UXG2 1013 aaKnown RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 CARNMT1Q8N4J0 409 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 MYEOVQ96EZ4 313 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 NPY6RQ99463 290 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 PRMT1Q99873 361 aaKnown RBP17.22■□□□□ 0.35
PKP3-209ENST00000533069 RTKNQ9BST9 563 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 NUP58Q9BVL2 599 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 TMEM245Q9H330 911 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 FBRSQ9HAH7 460 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 IMPACTQ9P2X3 320 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.22■□□□□ 0.35
PKP3-209ENST00000533069 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 IGHV1OR15-9A0A0B4J2B8 117 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 H0Y626 953 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 MOCS3O95396 460 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 F9P00740 461 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 CYP1A1P04798 512 aaPredicted RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 TPM1P09493 284 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 RPL6Q02878 288 aaKnown RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 LMAN2Q12907 356 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 NME3Q13232 169 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 SF3A2Q15428 464 aaKnown RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 CCDC6Q16204 474 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 PTPRNQ16849 979 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 BRMS1LQ5PSV4 323 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 NAA35Q5VZE5 725 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 LYSMD4Q5XG99 296 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.35
PKP3-209ENST00000533069 ARCQ7LC44 396 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 DGLUCYQ7Z3D6 616 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 CFAP52Q8N1V2 620 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 CYB5D2Q8WUJ1 264 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 CPA5Q8WXQ8 436 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 TTC17Q96AE7 1141 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 PGAP3Q96FM1 320 aaPredicted RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 MKRN2Q9H000 416 aaKnown RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 KIAA1522Q9P206 1035 aaPredicted RBP17.21■□□□□ 0.35
PKP3-209ENST00000533069 CYP8B1Q9UNU6 501 aa17.21■□□□□ 0.35
PKP3-209ENST00000533069 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SLC30A4O14863 429 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 MMP8P22894 467 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 HOXD12P35452 270 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 CXCR3P49682 368 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SULT1E1P49888 294 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 LIMK1P53667 647 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 OXCT1P55809 520 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 RNASE9P60153 205 aaKnown RBP17.2■□□□□ 0.34
PKP3-209ENST00000533069 ST8SIA6P61647 398 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 FMO1Q01740 532 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SLC12A1Q13621 1099 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SLC25A52Q3SY17 297 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
PKP3-209ENST00000533069 OTUD1Q5VV17 481 aaPredicted RBP17.2■□□□□ 0.34
PKP3-209ENST00000533069 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 VSTM4Q8IW00 320 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 TMEFF1Q8IYR6 380 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 KDM1BQ8NB78 822 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 OR2T3Q8NH03 318 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 PRCCQ92733 491 aaPredicted RBP17.2■□□□□ 0.34
PKP3-209ENST00000533069 ERLEC1Q96DZ1 483 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SIPA1Q96FS4 1042 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 EDEM3Q9BZQ6 932 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 SLC6A17Q9H1V8 727 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 USP36Q9P275 1121 aaKnown RBP17.2■□□□□ 0.34
PKP3-209ENST00000533069 EML5Q05BV3 1969 aa17.2■□□□□ 0.34
PKP3-209ENST00000533069 GOLGA8SH3BPF8 625 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 ACADMP11310 421 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 CHRNB2P17787 502 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 PBX1P40424 430 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 CSKP41240 450 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 PTGER3P43115 390 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 COPAP53621 1224 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 ATXN1P54253 815 aaKnown RBP17.19■□□□□ 0.34
PKP3-209ENST00000533069 FSCBQ5H9T9 825 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 FBXL22Q6P050 247 aa17.19■□□□□ 0.34
PKP3-209ENST00000533069 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms