RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 MATKP42679 507 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 GABRB2P47870 512 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 COPAP53621 1224 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 IRX4P78413 519 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 CAMK2GQ13555 558 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-204ENST00000532550 PTPRNQ16849 979 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 TRIM61Q5EBN2 209 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF677Q86XU0 584 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 OR2T3Q8NH03 318 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 CEP76Q8TAP6 659 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 FOXJ1Q92949 421 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 LMLNQ96KR4 655 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 SPAG5Q96R06 1193 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 EDEM2Q9BV94 578 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 NLRC4Q9NPP4 1024 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 CD93Q9NPY3 652 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 EVLQ9UI08 416 aaPredicted RBP17.82■□□□□ 0.44
PHRF1-204ENST00000532550 PILRBQ9UKJ0 227 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 STAP1Q9ULZ2 295 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 CKAP5Q14008 2032 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 MED19A0JLT2 244 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 LNP1A1A4G5 178 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 LRRC10BA6NIK2 292 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 ASLP04424 464 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 MMEP08473 750 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 HOXD12P35452 270 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 SOX5P35711 763 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 CSKP41240 450 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 STAT1P42224 750 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 TPMTP51580 245 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 UBXN1Q04323 297 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 TYRO3Q06418 890 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 SYCP1Q15431 976 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 FSCBQ5H9T9 825 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 RABGAP1LQ5R372 815 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 SYCP2LQ5T4T6 812 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 FAM102AQ5T9C2 384 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 SND1Q7KZF4 910 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 RABEPKQ7Z6M1 372 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 RGL4Q8IZJ4 473 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF366Q8N895 744 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 NEK11Q8NG66 645 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 CPA5Q8WXQ8 436 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 TOE1Q96GM8 510 aaKnown RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF419Q96HQ0 510 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 PRMT1Q99873 361 aaKnown RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 NUP58Q9BVL2 599 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 WDCPQ9H6R7 721 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 FBRSQ9HAH7 460 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 TMEM51Q9NW97 253 aa17.81■□□□□ 0.44
PHRF1-204ENST00000532550 WSB2Q9NYS7 404 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 USP36Q9P275 1121 aaKnown RBP17.81■□□□□ 0.44
PHRF1-204ENST00000532550 FAM170AA1A519 330 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 C4orf47A7E2U8 309 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 F9P00740 461 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 SCNN1AP37088 669 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 CDR2Q01850 454 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 DUOXA1Q1HG43 343 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 PITRM1Q5JRX3 1037 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 TTC39BQ5VTQ0 682 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-204ENST00000532550 DAB2IPQ5VWQ8 1189 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 SLC23A3Q6PIS1 610 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 MMS22LQ6ZRQ5 1243 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 SLC41A1Q8IVJ1 513 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 EPS8L1Q8TE68 723 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 HSPA12BQ96MM6 686 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 RPRD1AQ96P16 312 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-204ENST00000532550 PPP1R9BQ96SB3 815 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 TMEM9BQ9NQ34 198 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 PRSS16Q9NQE7 514 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 TMEM63CQ9P1W3 806 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 INTS6Q9UL03 887 aaKnown RBP17.8■□□□□ 0.44
PHRF1-204ENST00000532550 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
PHRF1-204ENST00000532550 ATXN2Q99700 1313 aaKnown RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 LGALS16A8MUM7 142 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 GOLGA8SH3BPF8 625 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 CFIP05156 583 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 SULT1E1P49888 294 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 OXCT1P55809 520 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 JAM2P57087 298 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 SLC12A1Q13621 1099 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 AUHQ13825 339 aaKnown RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 NCAPHQ15003 741 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 C2CD6Q53TS8 623 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 PPM1JQ5JR12 505 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 WDR45BQ5MNZ6 344 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 PEAR1Q5VY43 1037 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 NAA35Q5VZE5 725 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 RNF219Q5W0B1 726 aaPredicted RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 CACUL1Q86Y37 369 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 AOPEPQ8N6M6 819 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 KDM1BQ8NB78 822 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 NPY6RQ99463 290 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 GPR174Q9BXC1 333 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 SIK2Q9H0K1 926 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 NOCTQ9UK39 431 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms