RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 SLC27A6Q9Y2P4 619 aa12.21□□□□□ -0.45
PPFIA1-220ENST00000532024 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
PPFIA1-220ENST00000532024 REXO2Q9Y3B8 237 aaKnown RBP12.21□□□□□ -0.45
PPFIA1-220ENST00000532024 COL4A3Q01955 1670 aa12.21□□□□□ -0.45
PPFIA1-220ENST00000532024 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 MACROD2A1Z1Q3 448 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TBC1D3BA6NDS4 549 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 H3BRJ5 948 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 FGF10O15520 208 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 DAPK3O43293 454 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CREB3O43889 395 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 KAT7O95251 611 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 GJC1P36383 396 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 GGCXP38435 758 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 GALK1P51570 392 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CDH4P55283 916 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TPI1P60174 286 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 KRT81Q14533 505 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 EIF4HQ15056 248 aaKnown RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 RAB6CQ53S08 254 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TMEM196Q5HYL7 178 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TXNDC11Q6PKC3 985 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 RHOT1Q8IXI2 618 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CCAR2Q8N163 923 aaKnown RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 SYNPOQ8N3V7 929 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 RNF10Q8N5U6 811 aaKnown RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TERB1Q8NA31 727 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 PJA1Q8NG27 643 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 UCMAQ8WVF2 138 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 HSPH1Q92598 858 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CHFRQ96EP1 664 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 IER2Q9BTL4 223 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 RAB6CQ9H0N0 254 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 CATSPERBQ9H7T0 1116 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 TMPRSS4Q9NRS4 437 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 SIT1Q9Y3P8 196 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 KIAA1549LQ6ZVL6 1849 aa12.2□□□□□ -0.46
PPFIA1-220ENST00000532024 F5P12259 2224 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 FAM170BA6NMN3 283 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 EEF2KO00418 725 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 BUB1O43683 1085 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 LRIG2O94898 1065 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 RHOQP17081 205 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 CD72P21854 359 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 EPHB2P29323 1055 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 ETFBP38117 255 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 SGSHP51688 502 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 CLCN5P51795 746 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 SLC25A11Q02978 314 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 DMC1Q14565 340 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 DPYSL2Q16555 572 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 SMTNL2Q2TAL5 461 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 GAB4Q2WGN9 574 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 LRRC38Q5VT99 294 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 RNF43Q68DV7 783 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 TRMT11Q7Z4G4 463 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 BMP8AQ7Z5Y6 402 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 SETD3Q86TU7 594 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 C12orf40Q86WS4 652 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 AHI1Q8N157 1196 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 FBXL6Q8N531 539 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 TPCN2Q8NHX9 752 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 KIAA1524Q8TCG1 905 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 UBE2Q2Q8WVN8 375 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 ALS2CR12Q96Q35 445 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 PEBP4Q96S96 227 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 LACRTQ9GZZ8 138 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 ANLNQ9NQW6 1124 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 ABCB8Q9NUT2 735 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 DDX56Q9NY93 547 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 GGA2Q9UJY4 613 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 FBXO10Q9UK96 956 aa12.19□□□□□ -0.46
PPFIA1-220ENST00000532024 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 NPC1O15118 1278 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 PSTPIP1O43586 416 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 TIMM44O43615 452 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 ATG13O75143 517 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 ATP5BP06576 529 aaKnown RBP12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 RHOCP08134 193 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 RARAP10276 462 aa12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
PPFIA1-220ENST00000532024 AOC1P19801 751 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms