RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ANKRD6Q9Y2G4 727 aa13.29□□□□□ -0.28
TM9SF1-211ENST00000531406 SNX11Q9Y5W9 270 aa13.29□□□□□ -0.28
TM9SF1-211ENST00000531406 TAF4O00268 1085 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ASLP04424 464 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CD27P26842 260 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CSKP41240 450 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 GPD2P43304 727 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ST8SIA6P61647 398 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 SCAPQ12770 1279 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 NNTQ13423 1086 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 HNRNPA1L2Q32P51 320 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 MS4A13Q5J8X5 152 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 DENND1BQ6P3S1 775 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CFAP52Q8N1V2 620 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CARNMT1Q8N4J0 409 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 RHBDD1Q8TEB9 315 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CDC6Q99741 560 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 PABPC3Q9H361 631 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ST7Q9NRC1 585 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 CNTN6Q9UQ52 1028 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 NCKAP1Q9Y2A7 1128 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
TM9SF1-211ENST00000531406 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.28
TM9SF1-211ENST00000531406 BICDL2A1A5D9 508 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 TYW5A2RUC4 315 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 KCNK3O14649 394 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 FLRT2O43155 660 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 SART1O43290 800 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 RNASEH1O60930 286 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 SIN3BO75182 1162 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 MOCS2O96007 188 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 IGHV4-34P06331 123 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ATXN1LP0C7T5 689 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 KRT5P13647 590 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ACADSBP45954 432 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 GRIA4P48058 902 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 MORC3Q14149 939 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ARID5BQ14865 1188 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 FSCBQ5H9T9 825 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 SYPL2Q5VXT5 272 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 MMS22LQ6ZRQ5 1243 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 USP30Q70CQ3 517 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 BEND5Q7L4P6 421 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 TAC4Q86UU9 113 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 PROSER1Q86XN7 944 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 CCDC117Q8IWD4 279 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 KDM1BQ8NB78 822 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 GANCQ8TET4 914 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 STK32AQ8WU08 396 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 SLC4A5Q9BY07 1137 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 NUCKS1Q9H1E3 243 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 TOR4AQ9NXH8 423 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 FBXL12Q9NXK8 326 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 SCML1Q9UN30 329 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ERVW-1Q9UQF0 538 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 BTBD3Q9Y2F9 522 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 ZFYVE26Q68DK2 2539 aa13.27□□□□□ -0.29
TM9SF1-211ENST00000531406 PCNX2A6NKB5 2137 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 TTC34A8MYJ7 566 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 LUC7L3O95232 432 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 GNA14O95837 355 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 AFPP02771 609 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 PI4KAP42356 2102 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 CTSOP43234 321 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 GALCP54803 685 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 STX17P56962 302 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 CDH18Q13634 790 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 MEA1Q16626 185 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 PITRM1Q5JRX3 1037 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 KCNT1Q5JUK3 1230 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 C9orf64Q5T6V5 341 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 KIAA0895LQ68EN5 471 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 LAYNQ6UX15 382 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 DHX40Q8IX18 779 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 LGI2Q8N0V4 545 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 IGSF8Q969P0 613 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 TRIM62Q9BVG3 475 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 UBE2TQ9NPD8 197 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 SERGEFQ9UGK8 458 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 CYTH4Q9UIA0 394 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 XPO7Q9UIA9 1087 aaKnown RBP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 LHX6Q9UPM6 363 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 CTNND2Q9UQB3 1225 aa13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.26□□□□□ -0.29
TM9SF1-211ENST00000531406 FAM208BQ5VWN6 2430 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms