RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 A0A1W2PP55 124 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 H0Y8X5 98 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 TAF4O00268 1085 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 CAPN9O14815 690 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 SART1O43290 800 aaKnown RBP16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 SIN3BO75182 1162 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 RNASEH2AO75792 299 aaKnown RBP16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 PSMD8P48556 350 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 NUCB2P80303 420 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 SFSWAPQ12872 951 aaKnown RBP16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 CNGA2Q16280 664 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 RRAGAQ7L523 313 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 KIAA0907Q7Z7F0 614 aaPredicted RBP16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 CHSY1Q86X52 802 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 HSFY1Q96LI6 401 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 CEP63Q96MT8 703 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 OMDQ99983 421 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 RSPH9Q9H1X1 276 aaPredicted RBP16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 TJP2Q9UDY2 1190 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 SCML1Q9UN30 329 aa16.4■□□□□ 0.22
CHMP4A-204ENST00000530996 LRRC72A6NJI9 287 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 MID1O15344 667 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 NUMBP49757 651 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 CST6Q15828 149 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 HNRNPA1L2Q32P51 320 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 PITRM1Q5JRX3 1037 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 NCEH1Q6PIU2 408 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 MMS22LQ6ZRQ5 1243 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 USP30Q70CQ3 517 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 TAC4Q86UU9 113 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 MARCH9Q86YJ5 346 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 MMAAQ8IVH4 418 aaKnown RBP16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 LGI2Q8N0V4 545 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 CFAP52Q8N1V2 620 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 GALNT15Q8N3T1 639 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 FIBINQ8TAL6 211 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 SKA1Q96BD8 255 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 FCRL2Q96LA5 508 aaPredicted RBP16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 ZSWIM1Q9BR11 485 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 IRX2Q9BZI1 471 aaPredicted RBP16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 OSGEPQ9NPF4 335 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 TOR4AQ9NXH8 423 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 SERGEFQ9UGK8 458 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 CTNND2Q9UQB3 1225 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 TLR6Q9Y2C9 796 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 GPSM3Q9Y4H4 160 aa16.39■□□□□ 0.21
CHMP4A-204ENST00000530996 PCNX2A6NKB5 2137 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 TTC34A8MYJ7 566 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 TNFSF14O43557 240 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 GABBR2O75899 941 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 IGHV4-34P06331 123 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 ABCB4P21439 1286 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 CTSOP43234 321 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 ACAP1Q15027 740 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 COL28A1Q2UY09 1125 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 RAP1GAP2Q684P5 730 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 TTC17Q96AE7 1141 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 KIAA1522Q9P206 1035 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 ERVW-1Q9UQF0 538 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 NAALADL1Q9UQQ1 740 aa16.38■□□□□ 0.21
CHMP4A-204ENST00000530996 EDDM13A0A1B0GTR0 161 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 BICDL2A1A5D9 508 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 FAM149AA5PLN7 773 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 PCDHGA12O60330 932 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 PPP1R2P41236 205 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 CTSKP43235 329 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 ACADSBP45954 432 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 RACK1P63244 317 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 GCNT1Q02742 428 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 NNTQ13423 1086 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 KCNT1Q5JUK3 1230 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 TMPRSS7Q7RTY8 843 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 SCUBE3Q8IX30 993 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 NELFBQ8WX92 580 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 MYO19Q96H55 970 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 DHTKD1Q96HY7 919 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 FAM204AQ9H8W3 233 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 XPO7Q9UIA9 1087 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 DMXL2Q8TDJ6 3036 aa16.37■□□□□ 0.21
CHMP4A-204ENST00000530996 SYNJ2BP-COX16A0A087WUM0 186 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 A0A1W2PPC4 97 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 F5H5T6 163 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 P4HA2O15460 535 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 MED7O43513 233 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 SRPRAP08240 638 aaKnown RBP16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 NNMTP40261 264 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 GALCP54803 685 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 ECT2LQ008S8 904 aa16.36■□□□□ 0.21
CHMP4A-204ENST00000530996 FSCBQ5H9T9 825 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms