RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LAMA4Q16363 1823 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 ATRXP46100 2492 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 COL4A4P53420 1690 aaPredicted RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 KIAA1217Q5T5P2 1943 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 A0A088AWK7 358 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 TPP1O14773 563 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 STAM2O75886 525 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 MATN4O95460 622 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 LDHAP00338 332 aaKnown RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 LGALS2P05162 132 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 SMIM10L2AP0DMW4 78 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 SMIM10L2BP0DMW5 78 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 KITP10721 976 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 AGFG1P52594 562 aaKnown RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 HTRA4P83105 476 aaPredicted RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 SLC25A3Q00325 362 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 SP2Q02086 613 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 FGL2Q14314 439 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 NEDD9Q14511 834 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 GRM4Q14833 912 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 TCTN1Q2MV58 587 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 LEXMQ3ZCV2 418 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 ANO6Q4KMQ2 910 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 RABL3Q5HYI8 236 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 DBF4BQ8NFT6 615 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 NLGN4YQ8NFZ3 816 aaPredicted RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 OR56A1Q8NGH5 318 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 IL31RAQ8NI17 732 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 SEPT8Q92599 483 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 APBB2Q92870 758 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 KLHL32Q96NJ5 620 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 PLEKHG4BQ96PX9 1271 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 C16orf70Q9BSU1 422 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 WDCPQ9H6R7 721 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 CHST12Q9NRB3 414 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 MRPS18AQ9NVS2 196 aaKnown RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 JKAMPQ9P055 326 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 ZNF215Q9UL58 517 aaPredicted RBP5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 FAM50BQ9Y247 325 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 TESMINQ9Y4I5 508 aa5.72□□□□□ -1.49
AMBRA1-209ENST00000529963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 ZNF785A8K8V0 405 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 IFIT3O14879 490 aaKnown RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 FIBPO43427 364 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 KCNA5P22460 613 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 HOXC8P31273 242 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 ICAM3P32942 547 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 BUD31P41223 144 aaPredicted RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 WTAPQ15007 396 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 CNN3Q15417 329 aaKnown RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 EPC2Q52LR7 807 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 XRRA1Q6P2D8 792 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 METTL7BQ6UX53 244 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 CYB5R4Q7L1T6 521 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 GDF7Q7Z4P5 450 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 KIAA0319LQ8IZA0 1049 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 RUFY2Q8WXA3 655 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 CUL5Q93034 780 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 MRPL38Q96DV4 380 aaKnown RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 INPP4AQ96PE3 977 aaPredicted RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 PIGSQ96S52 555 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 GPR20Q99678 358 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 C17orf80Q9BSJ5 609 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 IFIH1Q9BYX4 1025 aaKnown RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 TMEM60Q9H2L4 133 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 RIOX1Q9H6W3 641 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 ATP6V0A4Q9HBG4 840 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 KLHL11Q9NVR0 708 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 VSX1Q9NZR4 365 aaPredicted RBP5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 AGAP1Q9UPQ3 857 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 CDYLQ9Y232 598 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 CHST2Q9Y4C5 530 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 PCDHGB6Q9Y5F9 930 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 MYH6P13533 1939 aa5.71□□□□□ -1.5
AMBRA1-209ENST00000529963 FRMPD4Q14CM0 1322 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 PTPRSQ13332 1948 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 CFAP69A5D8W1 941 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 FAM227AF5H4B4 570 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 H3BNC9 293 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 NCK2O43639 380 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 NCR1O76036 304 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 IGHDP01880 384 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 ELANEP08246 267 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 NR4A1P22736 598 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 IL12RB1P42701 662 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 SOX8P57073 446 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 KRTAP10-2P60368 255 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 HSD11B2P80365 405 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 GPM6BQ13491 265 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 CRB2Q5IJ48 1285 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 CHST15Q7LFX5 561 aaPredicted RBP5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 SUGP1Q8IWZ8 645 aaKnown RBP5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 RHOT2Q8IXI1 618 aa5.7□□□□□ -1.5
AMBRA1-209ENST00000529963 NCOA7Q8NI08 942 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms