RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PCDHGA12O60330 932 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 ADH5P11766 374 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 KRT5P13647 590 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 CASP14P31944 242 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 USP8P40818 1118 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 STAT1P42224 750 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 MAP3K7CLP57077 242 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 PDE4CQ08493 712 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 RAB41Q5JT25 222 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 PMF1Q6P1K2 205 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 RHBDF2Q6PJF5 856 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 WDR59Q6PJI9 974 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 NUDT18Q6ZVK8 323 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 BHLHA9Q7RTU4 235 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 METTL3Q86U44 580 aaKnown RBP11.41□□□□□ -0.58
NEDD8-204ENST00000526430 SPACA3Q8IXA5 215 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 ETFBKMTQ8IXQ9 262 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 SLC20A1Q8WUM9 679 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 MRFAP1L1Q96HT8 127 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 SPATA17Q96L03 361 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 PCMTD1Q96MG8 357 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-204ENST00000526430 UBXN6Q9BZV1 441 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 KRT82Q9NSB4 513 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 MYO6Q9UM54 1294 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 PCDHGC3Q9UN70 934 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 STARD13Q9Y3M8 1113 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 AK5Q9Y6K8 562 aa11.41□□□□□ -0.58
NEDD8-204ENST00000526430 ANKRD17O75179 2603 aaKnown RBP11.4□□□□□ -0.58
NEDD8-204ENST00000526430 TBC1D3BA6NDS4 549 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 CBFA2T2O43439 604 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 AP1G2O75843 785 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 JUPP14923 745 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 CD19P15391 556 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 CD6P30203 668 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 GNA15P30679 374 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 HNRNPH3P31942 346 aaKnown RBP11.4□□□□□ -0.58
NEDD8-204ENST00000526430 CDH5P33151 784 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-204ENST00000526430 GRIK1P39086 918 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 UCNP55089 124 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 SLC7A9P82251 487 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 FMO1Q01740 532 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 PIGZQ86VD9 579 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 SCN4BQ8IWT1 228 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 C1orf216Q8TAB5 229 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
NEDD8-204ENST00000526430 CPLX3Q8WVH0 158 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 MED8Q96G25 268 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 SMARCD1Q96GM5 515 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 MRGPRX1Q96LB2 322 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 GABRG3Q99928 467 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 NUP58Q9BVL2 599 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 TJP2Q9UDY2 1190 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 HCN2Q9UL51 889 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 USP3Q9Y6I4 520 aa11.4□□□□□ -0.58
NEDD8-204ENST00000526430 PLXNA2O75051 1894 aa11.4□□□□□ -0.59
NEDD8-204ENST00000526430 NOTCH2Q04721 2471 aa11.4□□□□□ -0.59
NEDD8-204ENST00000526430 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 PAPSS1O43252 624 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 THAP12O43422 761 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 OLFM2O95897 454 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 CYP1A1P04798 512 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 MMEP08473 750 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 C1SP09871 688 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 ZDHHC11BP0C7U3 371 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 FAM200BP0CF97 657 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 SKILP12757 684 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 NCAM1P13591 858 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 ACTN2P35609 894 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 PRKCIP41743 596 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 PLA2G4AP47712 749 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 KIF11P52732 1056 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 TMPRSS3P57727 454 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 ZBED6P86452 979 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 PTK2Q05397 1052 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 MEA1Q16626 185 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 INAVAQ3KP66 663 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 COLEC12Q5KU26 742 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 TERB1Q8NA31 727 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 SLC30A5Q8TAD4 765 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 SNRNP27Q8WVK2 155 aaKnown RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 KCTD13Q8WZ19 329 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 TTC9Q92623 222 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 CEP295NLQ96MC4 621 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 MED10Q9BTT4 135 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 SLC4A5Q9BY07 1137 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 LHX5Q9H2C1 402 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 DMAP1Q9NPF5 467 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-204ENST00000526430 CD93Q9NPY3 652 aa11.39□□□□□ -0.59
NEDD8-204ENST00000526430 WSB2Q9NYS7 404 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms