RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 LCP1P13796 627 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 VAV1P15498 845 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 ITPKBP27987 946 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 HARS2P49590 506 aaKnown RBP14.83□□□□□ -0.04
CPSF1-201ENST00000526271 NUMBP49757 651 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 CCT8P50990 548 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 NUCB2P80303 420 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 LRMPQ12912 555 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 NCEH1Q6PIU2 408 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 LCLAT1Q6UWP7 414 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 LMO3Q8TAP4 145 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 ERCC4Q92889 916 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-201ENST00000526271 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 NEUROG2Q9H2A3 272 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 LRRC4Q9HBW1 653 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 OLA1Q9NTK5 396 aaKnown RBP14.83□□□□□ -0.04
CPSF1-201ENST00000526271 SLCO3A1Q9UIG8 710 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 A0A1W2PP55 124 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PLK4O00444 970 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 VILLO15195 856 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 VDRP11473 427 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 BRD2P25440 801 aaKnown RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 RPL13P26373 211 aaKnown RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 GRK6P43250 576 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PPP2CBP62714 309 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PPP2CAP67775 309 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PITX1P78337 314 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 ZBTB16Q05516 673 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PNOCQ13519 176 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 HNRNPA1L2Q32P51 320 aaKnown RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 CCDC157Q569K6 752 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 MPP7Q5T2T1 576 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 ZNF776Q68DI1 518 aaPredicted RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 ANKRD40Q6AI12 368 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 DHX40Q8IX18 779 aaKnown RBP14.82□□□□□ -0.04
CPSF1-201ENST00000526271 CFAP52Q8N1V2 620 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 FIBINQ8TAL6 211 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 SAP25Q8TEE9 199 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 SPATA32Q96LK8 384 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 SGK2Q9HBY8 427 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 ABCC13Q9NSE7 274 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 FBXL12Q9NXK8 326 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 STIM2Q9P246 746 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 PLA2G4CQ9UP65 541 aa14.82□□□□□ -0.04
CPSF1-201ENST00000526271 TDRD6O60522 2096 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 ZNF202O95125 648 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 DNTTP04053 509 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 CD19P15391 556 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 RPL34P49207 117 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 ACADVLP49748 655 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 RACK1P63244 317 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 ARID5BQ14865 1188 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 USP30Q70CQ3 517 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 SPATS2Q86XZ4 545 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 MMAAQ8IVH4 418 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 SCUBE3Q8IX30 993 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 APCDD1Q8J025 514 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 TTC39CQ8N584 583 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 CCDC150Q8NCX0 1101 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 ADAM32Q8TC27 787 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 DQX1Q8TE96 717 aaKnown RBP14.81□□□□□ -0.04
CPSF1-201ENST00000526271 RNF139Q8WU17 664 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 TSC1Q92574 1164 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 PTPRN2Q92932 1015 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 FAM131CQ96AQ9 280 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 ADAMTS1Q9UHI8 967 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 NAALADL1Q9UQQ1 740 aa14.81□□□□□ -0.04
CPSF1-201ENST00000526271 FAM47DPA6NHR8 397 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 LTFP02788 710 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 SETSIPP0DME0 302 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 TRIM21P19474 475 aaKnown RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 DRD3P35462 400 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 STK19P49842 368 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ZNF445P59923 1031 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ARID5AQ03989 594 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 BNIP3Q12983 259 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 EIF4EBP2Q13542 120 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 TEAD4Q15561 434 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 CST6Q15828 149 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 DCAF17Q5H9S7 520 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 MS4A13Q5J8X5 152 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 PITRM1Q5JRX3 1037 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 SYPL2Q5VXT5 272 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 OR52K2Q8NGK3 314 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 AZIN2Q96A70 460 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ELF4Q99607 663 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-201ENST00000526271 FBRSQ9HAH7 460 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 CHMP5Q9NZZ3 219 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ARHGAP20Q9P2F6 1191 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 CYTH4Q9UIA0 394 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ERVW-1Q9UQF0 538 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 RAI2Q9Y5P3 530 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 ITIH6Q6UXX5 1313 aa14.8□□□□□ -0.04
CPSF1-201ENST00000526271 RNF103O00237 685 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms