RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ZNF683Q8IZ20 524 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 IGSF8Q969P0 613 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 GABRG3Q99928 467 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 RAB6CQ9H0N0 254 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 CD248Q9HCU0 757 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 CEP192Q8TEP8 1941 aa13.38□□□□□ -0.27
CTSB-209ENST00000525315 A0A1W2PQF6 199 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 PLEKP08567 350 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 PABPC1P11940 636 aaKnown RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 GPD1P21695 349 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 ADRA1BP35368 520 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 ZNF143P52747 638 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 PLK1P53350 603 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 LMAN2Q12907 356 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 RABGAP1LQ5R372 815 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 HEATR6Q6AI08 1181 aaKnown RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 SDE2Q6IQ49 451 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 CHST9Q7L1S5 443 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 SUMF1Q8NBK3 374 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 OR8K1Q8NGG5 319 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 PARVAQ9NVD7 372 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 INTS6Q9UL03 887 aaKnown RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 VANGL2Q9ULK5 521 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 CHD5Q8TDI0 1954 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 MUC22E2RYF6 1773 aaPredicted RBP13.37□□□□□ -0.27
CTSB-209ENST00000525315 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 WDR87Q6ZQQ6 2873 aa13.37□□□□□ -0.27
CTSB-209ENST00000525315 ZFHX2Q9C0A1 2572 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 IGLV3-10A0A075B6K4 115 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 A0A1B0GVM2 712 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 TCAF2A6NFQ2 919 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 TMEM191CA6NGB0 347 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 WASH3PC4AMC7 463 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 H0Y626 953 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 AXIN1O15169 862 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 WASP42768 502 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 HDAC4P56524 1084 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 TBX2Q13207 712 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 SLC12A1Q13621 1099 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 ZNF234Q14588 700 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 VPS36Q86VN1 386 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 CCDC117Q8IWD4 279 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 CHPFQ8IZ52 775 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 CCAR2Q8N163 923 aaKnown RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 FAM172AQ8WUF8 416 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
CTSB-209ENST00000525315 CNPY3Q9BT09 278 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTSB-209ENST00000525315 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 EPC1Q9H2F5 836 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 NENFQ9UMX5 172 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 STON1Q9Y6Q2 735 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 THADAQ6YHU6 1953 aa13.36□□□□□ -0.27
CTSB-209ENST00000525315 A0A087X0T9 212 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 CLDN11O75508 207 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 ALDH1A2O94788 518 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 DLDP09622 509 aaKnown RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 FAM228BP0C875 321 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 MYBL1P10243 752 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 HOXB2P14652 356 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 IL12RB1P42701 662 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 MRE11P49959 708 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 CDH4P55283 916 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 OXCT1P55809 520 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 OGDHQ02218 1023 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 CDH18Q13634 790 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 PTPRNQ16849 979 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 CDO1Q16878 200 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 ASTE1Q2TB18 679 aaPredicted RBP13.35□□□□□ -0.27
CTSB-209ENST00000525315 ARL13BQ3SXY8 428 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 FUT11Q495W5 492 aa13.35□□□□□ -0.27
CTSB-209ENST00000525315 CXorf57Q6NSI4 855 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms