RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ABCB8Q9NUT2 735 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ZSCAN32Q9NX65 697 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ELOVL2Q9NXB9 296 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 THAP10Q9P2Z0 257 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 OR51B4Q9Y5P0 310 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 R4GN57 208 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 WASH3PC4AMC7 463 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 CCP110O43303 1012 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 CNTN5O94779 1100 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 PABPC1P11940 636 aaKnown RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 GPD1P21695 349 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 SDC4P31431 198 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 FNTBP49356 437 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 NRG1Q02297 640 aaPredicted RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 LMAN2Q12907 356 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 MTA1Q13330 715 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 PTPRNQ16849 979 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 FUT11Q495W5 492 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 TDRD12Q587J7 1177 aaKnown RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 CYP4V2Q6ZWL3 525 aaPredicted RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 ANKS1BQ7Z6G8 1248 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 WDR5BQ86VZ2 330 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 RASSF3Q86WH2 238 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 CAMKK1Q8N5S9 505 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 FAM172AQ8WUF8 416 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
CLN8-207ENST00000524258 RNF34Q969K3 372 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 TTC17Q96AE7 1141 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 ACDQ96AP0 544 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 MYO19Q96H55 970 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 CNPY3Q9BT09 278 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 STIM2Q9P246 746 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 GGA2Q9UJY4 613 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 PCDHGA2Q9Y5H1 932 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 ZNF292O60281 2723 aa12.35□□□□□ -0.43
CLN8-207ENST00000524258 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 F5H5T6 163 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 FAM72CH0Y354 149 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 HRO43593 1189 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 TIMM44O43615 452 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 CYP1A2P05177 515 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 NTSR1P30989 418 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 PLA2G5P39877 138 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 PXNP49023 591 aaPredicted RBP12.34□□□□□ -0.43
CLN8-207ENST00000524258 PLK1P53350 603 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 SCAPQ12770 1279 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 EIF4HQ15056 248 aaKnown RBP12.34□□□□□ -0.43
CLN8-207ENST00000524258 ALFQ53S48 1182 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 FAM72AQ5TYM5 149 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 FAM72DQ6L9T8 149 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 KIAA1211LQ6NV74 962 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 ALKBH5Q6P6C2 394 aaKnown RBP12.34□□□□□ -0.43
CLN8-207ENST00000524258 CHST9Q7L1S5 443 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 FAM72BQ86X60 149 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 MFN1Q8IWA4 741 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 CCAR2Q8N163 923 aaKnown RBP12.34□□□□□ -0.43
CLN8-207ENST00000524258 CCDC185Q8N715 623 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 SUMF1Q8NBK3 374 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 WFIKKN2Q8TEU8 576 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 FNIP1Q8TF40 1166 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 NTAN1Q96AB6 310 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 ARHGEF26Q96DR7 871 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 HHIPQ96QV1 700 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 SIK2Q9H0K1 926 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 OSBPL2Q9H1P3 480 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 PARVAQ9NVD7 372 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
CLN8-207ENST00000524258 VANGL2Q9ULK5 521 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
CLN8-207ENST00000524258 A0A1B0GVM2 712 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 TCAF2A6NFQ2 919 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 MYBL1P10243 752 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 FECHP22830 423 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 MZF1P28698 734 aaPredicted RBP12.33□□□□□ -0.44
CLN8-207ENST00000524258 IL12RB1P42701 662 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 WASP42768 502 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 GALCP54803 685 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 ZNF234Q14588 700 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 SLC18A3Q16572 532 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 CDO1Q16878 200 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.44
CLN8-207ENST00000524258 MBLAC2Q68D91 279 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
CLN8-207ENST00000524258 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms