RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TRIM55Q9BYV6 548 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LMAN2LQ9H0V9 348 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 IGFLR1Q9H665 355 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 EPHX3Q9H6B9 360 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 RC3H2Q9HBD1 1191 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CD320Q9NPF0 282 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 RGS18Q9NS28 235 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CLDND1Q9NY35 253 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 HEY2Q9UBP5 337 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 GABBR1Q9UBS5 961 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ZNF212Q9UDV6 495 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ZNF180Q9UJW8 692 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ST3GAL5Q9UNP4 418 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 FAM50BQ9Y247 325 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 MRPL42Q9Y6G3 142 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 COL1A2P08123 1366 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 SCN5AQ14524 2016 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RALGAPA2Q2PPJ7 1873 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 LRRD1A4D1F6 860 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 A8MXQ7 604 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 E5RJQ4 531 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 F8W8V4 182 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SGK1O00141 431 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 NRG2O14511 850 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 FCHO1O14526 889 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 MGEA5O60502 916 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 GPR32O75388 356 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SPAG6O75602 509 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 CSPG5O95196 566 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 C22orf31O95567 290 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 LDHAP00338 332 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 VTNP04004 478 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 PIM1P11309 404 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 KDELR1P24390 212 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 BRD2P25440 801 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 CALRP27797 417 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 IL1R2P27930 398 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 ARFIP2P53365 341 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 AP3M2P53677 418 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 FAM189BP81408 668 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 HYAL1Q12794 435 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 EMC2Q15006 297 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 NOMO1Q15155 1222 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RCN1Q15293 331 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 DBN1Q16643 649 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 GSTA3Q16772 222 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TEX44Q53QW1 395 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SNX30Q5VWJ9 437 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SCARA3Q6AZY7 606 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SLFN12LQ6IEE8 588 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 EFCAB12Q6NXP0 572 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 CAPN12Q6ZSI9 719 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 CYP4V2Q6ZWL3 525 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 MYLK4Q86YV6 388 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RHPN2Q8IUC4 686 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 THNSL1Q8IYQ7 743 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 KLHL23Q8NBE8 558 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM35BQ8NCS4 154 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SPPL3Q8TCT6 385 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 PYROXD1Q8WU10 500 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 WDR60Q8WVS4 1066 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TEKT4Q8WW24 435 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 AZIN2Q96A70 460 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 HAUS1Q96CS2 278 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RTP4Q96DX8 246 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 BICD1Q96G01 975 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 FAM167AQ96KS9 214 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 C7orf26Q96N11 449 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 PPP1R16BQ96T49 567 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SH3GL3Q99963 347 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 YIPF3Q9GZM5 350 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 C12orf65Q9H3J6 166 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 DHX33Q9H6R0 707 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SYNCQ9H7C4 482 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 MANSC1Q9H8J5 431 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 PLAC1Q9HBJ0 212 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 GPAMQ9HCL2 828 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 SPATS2LQ9NUQ6 558 aaKnown RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TAS2R1Q9NYW7 299 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RBAKQ9NYW8 714 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-223ENST00000524033 DNAJB4Q9UDY4 337 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 RAPGEFL1Q9UHV5 662 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 AKT3Q9Y243 479 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TBC1D30Q9Y2I9 924 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 PCDHB12Q9Y5F1 795 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 TEX264Q9Y6I9 313 aa8.07□□□□□ -1.12
SPIDR-223ENST00000524033 IQANK1A0A1B0GTG1 560 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 TBKBP1A7MCY6 615 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 H0Y3Z8 333 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 APOC4-APOC2K7ER74 178 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 AXIN1O15169 862 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 TBX10O75333 385 aa8.06□□□□□ -1.12
SPIDR-223ENST00000524033 LRCH4O75427 683 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms