RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SENP7Q9BQF6 1050 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ELOVL1Q9BW60 279 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 PABPC3Q9H361 631 aaKnown RBP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 PRDM8Q9NQV8 689 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ADARB2Q9NS39 739 aaKnown RBP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ARL8BQ9NVJ2 186 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 GRHPRQ9UBQ7 328 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 CNTN6Q9UQ52 1028 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 ZBTB1Q9Y2K1 713 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 HEMK1Q9Y5R4 338 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-206ENST00000523469 PZPP20742 1482 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 PRXQ9BXM0 1461 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 AFF2P51816 1311 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 WDR17Q8IZU2 1322 aa6.7□□□□□ -1.34
CPNE3-206ENST00000523469 INO80Q9ULG1 1556 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 FGD6Q6ZV73 1430 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 KIF28PB7ZC32 967 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 CELA2AP08217 269 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SFPQP23246 707 aaKnown RBP eCLIP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 TACR3P29371 465 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 MPGP29372 298 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 VPS41P49754 854 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 CDK7P50613 346 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SRSF4Q08170 494 aaKnown RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 ZNF268Q14587 947 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SEC23BQ15437 767 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 ANKRD40Q6AI12 368 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 MIS18BP1Q6P0N0 1132 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 RINLQ6ZS11 566 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 OSR1Q8TAX0 266 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 ASB12Q8WXK4 309 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 DDB2Q92466 427 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 P2RY11Q96G91 374 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 ZNF845Q96IR2 970 aaPredicted RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 AGO4Q9HCK5 861 aaKnown RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 ASNSD1Q9NWL6 643 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 CFAP65Q6ZU64 1925 aaKnown RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SYCP2Q9BX26 1530 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SPAG9O60271 1321 aaKnown RBP6.69□□□□□ -1.34
CPNE3-206ENST00000523469 TIAM1Q13009 1591 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 TMEM94Q12767 1356 aa6.69□□□□□ -1.34
CPNE3-206ENST00000523469 SCAF11Q99590 1463 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 MAP3K1Q13233 1512 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 CGB1A6NKQ9 187 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 C16orf96A6NNT2 1141 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 PPP6R2O75170 966 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 EPHB2P29323 1055 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 GRK6P43250 576 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 PNLIPRP1P54315 467 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 TLE3Q04726 772 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 CCDC142Q17RM4 750 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 FAM110CQ1W6H9 321 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 GLE1Q53GS7 698 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 SRRM1Q8IYB3 904 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 MYCT1Q8N699 235 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 SCAMP5Q8TAC9 235 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 TRAPPC12Q8WVT3 735 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 HMGB4Q8WW32 186 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 TRMT61AQ96FX7 289 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 FAM118BQ9BPY3 351 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 PAGR1Q9BTK6 254 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 VPS16Q9H269 839 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 PDGFCQ9NRA1 345 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 DAPP1Q9UN19 280 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 C19orf53Q9UNZ5 99 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-206ENST00000523469 NHSL1Q5SYE7 1610 aa6.68□□□□□ -1.34
CPNE3-206ENST00000523469 TROQ12816 1431 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 UBR1Q8IWV7 1749 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 M0QYT0 321 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 DSCR3O14972 297 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 CYP3A4P08684 503 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 STAT6P42226 847 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 ZNF84P51523 738 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 RPL15P61313 204 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 MRPS21P82921 87 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 COLEC12Q5KU26 742 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 NEK8Q86SG6 692 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 SRFBP1Q8NEF9 429 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 CCT6BQ92526 530 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 MAP4K1Q92918 833 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 DDX23Q9BUQ8 820 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 MECRQ9BV79 373 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 TMEM120AQ9BXJ8 343 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 BRD8Q9H0E9 1235 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 MLXIPQ9HAP2 919 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 LIN7CQ9NUP9 197 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 SPATA31A5Q5VU36 1347 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 SPATA31A7Q8IWB4 1347 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 KDM5AP29375 1690 aaKnown RBP6.67□□□□□ -1.34
CPNE3-206ENST00000523469 MSH6P52701 1360 aa6.67□□□□□ -1.34
CPNE3-206ENST00000523469 NWD1Q149M9 1564 aa6.66□□□□□ -1.34
CPNE3-206ENST00000523469 C3orf70A6NLC5 250 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-206ENST00000523469 SLC38A8A6NNN8 435 aa6.66□□□□□ -1.34
CPNE3-206ENST00000523469 OVOL3O00110 214 aa6.66□□□□□ -1.34
CPNE3-206ENST00000523469 RRHO14718 337 aa6.66□□□□□ -1.34
CPNE3-206ENST00000523469 NBNO60934 754 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms