RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 WNT1P04628 370 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 SETSIPP0DME0 302 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 NUMBP49757 651 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 YWHAEP62258 255 aaKnown RBP26.91■■□□□ 1.9
PVT1-219ENST00000523427 RPS24P62847 133 aaKnown RBP26.91■■□□□ 1.9
PVT1-219ENST00000523427 CST6Q15828 149 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 USP30Q70CQ3 517 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 SCUBE3Q8IX30 993 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 CLEC4CQ8WTT0 213 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 MYEOVQ96EZ4 313 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 MYO19Q96H55 970 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 CNDP2Q96KP4 475 aaKnown RBP26.91■■□□□ 1.9
PVT1-219ENST00000523427 ELF4Q99607 663 aaPredicted RBP26.91■■□□□ 1.9
PVT1-219ENST00000523427 CEP83Q9Y592 693 aa26.91■■□□□ 1.9
PVT1-219ENST00000523427 A0A087WV48 116 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 DFNA5O60443 496 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 GABBR2O75899 941 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 LDOC1O95751 146 aaPredicted RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 ABCG1P45844 678 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 SEMG2Q02383 582 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 HNRNPA1L2Q32P51 320 aaKnown RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 MPP7Q5T2T1 576 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 NUGGCQ68CJ6 796 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 NADSYN1Q6IA69 706 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 PMF1Q6P1K2 205 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 MSANTD2Q6P1R3 559 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 TMPRSS12Q86WS5 348 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 CFAP52Q8N1V2 620 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 EID2Q8N6I1 236 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 HJURPQ8NCD3 748 aaPredicted RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 TFAP2BQ92481 460 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 SKA1Q96BD8 255 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 PRICKLE1Q96MT3 831 aaPredicted RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 MIS12Q9H081 205 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 INTS6Q9UL03 887 aaKnown RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 SCML1Q9UN30 329 aa26.9■■□□□ 1.9
PVT1-219ENST00000523427 SMG1Q96Q15 3661 aaKnown RBP26.9■■□□□ 1.9
PVT1-219ENST00000523427 TYW5A2RUC4 315 aaKnown RBP26.89■■□□□ 1.9
PVT1-219ENST00000523427 LRRC72A6NJI9 287 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 TTC34A8MYJ7 566 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 WNT9AO14904 365 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 CALCAP01258 141 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 C7P10643 843 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 ITPKBP27987 946 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 SLC8A1P32418 973 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 CTSOP43234 321 aaPredicted RBP26.89■■□□□ 1.9
PVT1-219ENST00000523427 PSMD8P48556 350 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 KRT85P78386 507 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 CDH18Q13634 790 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 TMEM270Q6UE05 265 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 CCDC117Q8IWD4 279 aaPredicted RBP26.89■■□□□ 1.9
PVT1-219ENST00000523427 FIBINQ8TAL6 211 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 TTC17Q96AE7 1141 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 MRGPRX3Q96LB0 322 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 AK5Q9Y6K8 562 aa26.89■■□□□ 1.9
PVT1-219ENST00000523427 BPTFQ12830 3046 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 M0QYV0 167 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 IRAK2O43187 625 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 MOCS2O96007 188 aaPredicted RBP26.88■■□□□ 1.89
PVT1-219ENST00000523427 IGLV3-27P01718 113 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 LTFP02788 710 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 SFSWAPQ12872 951 aaKnown RBP26.88■■□□□ 1.89
PVT1-219ENST00000523427 KCNJ12Q14500 433 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 FSCBQ5H9T9 825 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 LMLNQ96KR4 655 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 GOLPH3LQ9H4A5 285 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 ERVW-1Q9UQF0 538 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 PCDHB4Q9Y5E5 795 aa26.88■■□□□ 1.89
PVT1-219ENST00000523427 PLXNA2O75051 1894 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 PRB1P04280 392 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 ASLP04424 464 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 CD38P28907 300 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 MCCD1P59942 119 aaPredicted RBP26.87■■□□□ 1.89
PVT1-219ENST00000523427 SHBQ15464 509 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 PKDCCQ504Y2 493 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 C6orf118Q5T5N4 469 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 C9orf64Q5T6V5 341 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 LCLAT1Q6UWP7 414 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 ZNF557Q8N988 423 aaPredicted RBP26.87■■□□□ 1.89
PVT1-219ENST00000523427 OR2T34Q8NGX1 318 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 OR14C36Q8NHC7 312 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 ADAM32Q8TC27 787 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 NXPE2Q96DL1 559 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 DDX50Q9BQ39 737 aaKnown RBP26.87■■□□□ 1.89
PVT1-219ENST00000523427 NUCKS1Q9H1E3 243 aaKnown RBP26.87■■□□□ 1.89
PVT1-219ENST00000523427 GDF3Q9NR23 364 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 SLCO3A1Q9UIG8 710 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 COQ4Q9Y3A0 265 aa26.87■■□□□ 1.89
PVT1-219ENST00000523427 PAPSS1O43252 624 aaPredicted RBP26.86■■□□□ 1.89
PVT1-219ENST00000523427 RFPL3O75679 317 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 ZNF202O95125 648 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 BRD2P25440 801 aaKnown RBP26.86■■□□□ 1.89
PVT1-219ENST00000523427 HNF1BP35680 557 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 PITRM1Q5JRX3 1037 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 SLC35F5Q8WV83 523 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 IRGQQ8WZA9 623 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 SERAC1Q96JX3 654 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 RPL10LQ96L21 214 aaKnown RBP26.86■■□□□ 1.89
PVT1-219ENST00000523427 TSG101Q99816 390 aa26.86■■□□□ 1.89
PVT1-219ENST00000523427 KIAA1257Q9ULG3 409 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms