RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 CSKP41240 450 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 GALCP54803 685 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CDH18Q13634 790 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CST6Q15828 149 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 HNRNPA1L2Q32P51 320 aaKnown RBP16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 FAM133BQ5BKY9 247 aaKnown RBP16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 KCNT1Q5JUK3 1230 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 NCEH1Q6PIU2 408 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 DHRS13Q6UX07 377 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 TMPRSS12Q86WS5 348 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 DHX40Q8IX18 779 aaKnown RBP16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 AZIN2Q96A70 460 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 TTC17Q96AE7 1141 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 GOLPH3LQ9H4A5 285 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 MTG2Q9H4K7 406 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 AASDHPPTQ9NRN7 309 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CEP83Q9Y592 693 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PCDHB4Q9Y5E5 795 aa16.48■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PTPRBP23467 1997 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 A0A1B0GTQ1 180 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 E9PAM4 449 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 M0QYV0 167 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 MID1O15344 667 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PAPSS1O43252 624 aaPredicted RBP16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 FBXO21O94952 628 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 IGHV4-34P06331 123 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 ITGAVP06756 1048 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SLC6A4P31645 630 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 HNF1BP35680 557 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PRCPP42785 496 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 STILQ15468 1287 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CNGA2Q16280 664 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PKDCCQ504Y2 493 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 RNF219Q5W0B1 726 aaPredicted RBP16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PMF1Q6P1K2 205 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SCUBE3Q8IX30 993 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 KDM1BQ8NB78 822 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SLC35F5Q8WV83 523 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SLC6A18Q96N87 628 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SERPINB11Q96P15 392 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 NT5C1BQ96P26 610 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 ELF4Q99607 663 aaPredicted RBP16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 NEUROG2Q9H2A3 272 aa16.47■□□□□ 0.23
CSGALNACT1-213ENST00000523262 A0A1W2PP55 124 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 ENC1O14682 589 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 YKT6O15498 198 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CDK4P11802 303 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CETN1Q12798 172 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 CAMK2BQ13554 666 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 SLC45A4Q5BKX6 768 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 GATAD2AQ86YP4 633 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 MMAAQ8IVH4 418 aaKnown RBP16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 TFAP2BQ92481 460 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 HSFY1Q96LI6 401 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 ORAI3Q9BRQ5 295 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 MIS12Q9H081 205 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 FZD4Q9ULV1 537 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 TPX2Q9ULW0 747 aaKnown RBP16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 ERVW-1Q9UQF0 538 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 PCDHGA1Q9Y5H4 931 aa16.46■□□□□ 0.23
CSGALNACT1-213ENST00000523262 EDDM13A0A1B0GTR0 161 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 SART1O43290 800 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 LDOC1O95751 146 aaPredicted RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 SRPRAP08240 638 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 JUPP14923 745 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 CD38P28907 300 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 SLC8A1P32418 973 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 NNMTP40261 264 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 ARRB1P49407 418 aaPredicted RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 RPS24P62847 133 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 NUCB2P80303 420 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 LRRC63Q05C16 580 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 PNOCQ13519 176 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 ARID5BQ14865 1188 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 PITRM1Q5JRX3 1037 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 PRAMEF14Q5SWL7 426 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 C6orf118Q5T5N4 469 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 C9orf64Q5T6V5 341 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 ZNF658Q5TYW1 1059 aaPredicted RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 NADSYN1Q6IA69 706 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 PPM1KQ8N3J5 372 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 UBR7Q8N806 425 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 CLEC4CQ8WTT0 213 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 SLC35C1Q96A29 364 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 FAM149B1Q96BN6 582 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 NXPE2Q96DL1 559 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 MYO19Q96H55 970 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 CNDP2Q96KP4 475 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 LMLNQ96KR4 655 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 PRICKLE1Q96MT3 831 aaPredicted RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 DCBLD2Q96PD2 775 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 GTPBP4Q9BZE4 634 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
CSGALNACT1-213ENST00000523262 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms