RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MYO19Q96H55 970 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 LMLNQ96KR4 655 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 SERPINB11Q96P15 392 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 ORAI3Q9BRQ5 295 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
PRKDC-204ENST00000521331 METTL14Q9HCE5 456 aaKnown RBP15.45■□□□□ 0.06
PRKDC-204ENST00000521331 FBXL12Q9NXK8 326 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 STIM2Q9P246 746 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 FTSJ1Q9UET6 329 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 MUC22E2RYF6 1773 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 TRABD2BA6NFA1 517 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 LRRC72A6NJI9 287 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 E9PAM4 449 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 M0QYV0 167 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 KCNK3O14649 394 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 PMM2O15305 246 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 CSKP41240 450 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 NNTQ13423 1086 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 CDH18Q13634 790 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 CST6Q15828 149 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 ANKRD40Q6AI12 368 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 PDCD7Q8N8D1 485 aaKnown RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 HNRNPLLQ8WVV9 542 aaKnown RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 PRICKLE1Q96MT3 831 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 NT5C1BQ96P26 610 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 TPX2Q9ULW0 747 aaKnown RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 PCDHB4Q9Y5E5 795 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 NUMA1Q14980 2115 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 SMG1Q96Q15 3661 aaKnown RBP15.44■□□□□ 0.06
PRKDC-204ENST00000521331 NBEAQ8NFP9 2946 aa15.44■□□□□ 0.06
PRKDC-204ENST00000521331 CELSR3Q9NYQ7 3312 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 A0A1B0GTQ1 180 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 TARSL2A2RTX5 802 aaKnown RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 FAM47DPA6NHR8 397 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 PIK3R2O00459 728 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 YKT6O15498 198 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 SIN3BO75182 1162 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 GABBR2O75899 941 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 SMC2O95347 1197 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 MOCS3O95396 460 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 SRPRAP08240 638 aaKnown RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 FMO5P49326 533 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 GALCP54803 685 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 CYP4F3Q08477 520 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 CETN1Q12798 172 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 CAMK2BQ13554 666 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 SOWAHCQ53LP3 525 aaPredicted RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 KCNT1Q5JUK3 1230 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 NADSYN1Q6IA69 706 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 NCEH1Q6PIU2 408 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 TMPRSS12Q86WS5 348 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 DHX40Q8IX18 779 aaKnown RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 CARNMT1Q8N4J0 409 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 OR2T34Q8NGX1 318 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 FCRL2Q96LA5 508 aaPredicted RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 MRGPRX3Q96LB0 322 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 ELF4Q99607 663 aaPredicted RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 OMDQ99983 421 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 MTG2Q9H4K7 406 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 ADAMTS1Q9UHI8 967 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 INTS6Q9UL03 887 aaKnown RBP15.43■□□□□ 0.06
PRKDC-204ENST00000521331 FZD4Q9ULV1 537 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 TLR6Q9Y2C9 796 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 PCDHGA1Q9Y5H4 931 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 IGSF10Q6WRI0 2623 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 PLXNB3Q9ULL4 1909 aa15.43■□□□□ 0.06
PRKDC-204ENST00000521331 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 A0A1W2PP55 124 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 MID1O15344 667 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 RNASEH2AO75792 299 aaKnown RBP15.42■□□□□ 0.06
PRKDC-204ENST00000521331 CDK4P11802 303 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 BRD2P25440 801 aaKnown RBP15.42■□□□□ 0.06
PRKDC-204ENST00000521331 CCR5P51681 352 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 PMS1P54277 932 aaKnown RBP15.42■□□□□ 0.06
PRKDC-204ENST00000521331 RPS24P62847 133 aaKnown RBP15.42■□□□□ 0.06
PRKDC-204ENST00000521331 IL9RQ01113 521 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 CCDC157Q569K6 752 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 MS4A13Q5J8X5 152 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 MARCH9Q86YJ5 346 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 SCUBE3Q8IX30 993 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 PPM1KQ8N3J5 372 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 DQX1Q8TE96 717 aaKnown RBP15.42■□□□□ 0.06
PRKDC-204ENST00000521331 CLEC4CQ8WTT0 213 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 SLC6A18Q96N87 628 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 ZSWIM1Q9BR11 485 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 TRIM62Q9BVG3 475 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 NEUROG2Q9H2A3 272 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 SERGEFQ9UGK8 458 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 ERVW-1Q9UQF0 538 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 ADAMTS20P59510 1910 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 ITIH6Q6UXX5 1313 aa15.42■□□□□ 0.06
PRKDC-204ENST00000521331 URB1O60287 2271 aaKnown RBP15.41■□□□□ 0.06
PRKDC-204ENST00000521331 A0A087WV48 116 aa15.41■□□□□ 0.06
PRKDC-204ENST00000521331 FAM149AA5PLN7 773 aa15.41■□□□□ 0.06
PRKDC-204ENST00000521331 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
PRKDC-204ENST00000521331 P4HA2O15460 535 aa15.41■□□□□ 0.06
PRKDC-204ENST00000521331 ADH1BP00325 375 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms