RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RXFP2Q8WXD0 754 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 IGSF8Q969P0 613 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 NUP58Q9BVL2 599 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 HAUS4Q9H6D7 363 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 C2CD4BA6NLJ0 364 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 H0Y626 953 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 KRT3P12035 628 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 PDGFRAP16234 1089 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 RDXP35241 583 aaKnown RBP21.33■■□□□ 1.01
TRIM35-203ENST00000521253 PRKCIP41743 596 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 ATP11AP98196 1134 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 E2F5Q15329 346 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 RABGAP1LQ5R372 815 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 TTC39BQ5VTQ0 682 aaPredicted RBP21.33■■□□□ 1.01
TRIM35-203ENST00000521253 ACAD10Q6JQN1 1059 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 ZNF571Q7Z3V5 609 aaPredicted RBP21.33■■□□□ 1.01
TRIM35-203ENST00000521253 C14orf80Q86SX3 495 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 C3orf20Q8ND61 904 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 RPRD1AQ96P16 312 aaPredicted RBP21.33■■□□□ 1.01
TRIM35-203ENST00000521253 SIK2Q9H0K1 926 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 TMEM51Q9NW97 253 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 TAS2R14Q9NYV8 317 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 GMEB2Q9UKD1 530 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 INTS6Q9UL03 887 aaKnown RBP21.33■■□□□ 1.01
TRIM35-203ENST00000521253 VANGL2Q9ULK5 521 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 PAXBP1Q9Y5B6 917 aa21.33■■□□□ 1.01
TRIM35-203ENST00000521253 A0A1W2PQJ5 194 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 ENDOD1O94919 500 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 NDUFV2P19404 249 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 PRKCHP24723 683 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 SDC4P31431 198 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 IRAK1P51617 712 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 STARD3Q14849 445 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 PTPRNQ16849 979 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 C15orf59Q2T9L4 293 aaPredicted RBP21.32■■□□□ 1
TRIM35-203ENST00000521253 PLK5Q496M5 336 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 CCDC14Q49A88 953 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 RAB6CQ53S08 254 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 SERPINA13PQ6UXR4 307 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 FAM131BQ86XD5 332 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 CCAR2Q8N163 923 aaKnown RBP21.32■■□□□ 1
TRIM35-203ENST00000521253 RLN3Q8WXF3 142 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 ZC3H10Q96K80 434 aaKnown RBP21.32■■□□□ 1
TRIM35-203ENST00000521253 SELENOOQ9BVL4 669 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 RAB6CQ9H0N0 254 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 TMPRSS4Q9NRS4 437 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 PLA2G4CQ9UP65 541 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 SNX10Q9Y5X0 201 aa21.32■■□□□ 1
TRIM35-203ENST00000521253 A0A1B0GVM2 712 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 TCRBV5S1A1TA0A578 114 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 TCAF2A6NFQ2 919 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 TMCO5BA8MYB1 307 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 ATP5BP06576 529 aaKnown RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 RETP07949 1114 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 DLDP09622 509 aaKnown RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 SKILP12757 684 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 POLR2EP19388 210 aaKnown RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 RFC1P35251 1148 aaPredicted RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 P2RY2P41231 377 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 CSKP41240 450 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 KLHL30Q0D2K2 578 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 CDO1Q16878 200 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 FNDC3BQ53EP0 1204 aaKnown RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 SH3PXD2AQ5TCZ1 1133 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 DNAJC24Q6P3W2 148 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 MCOLN2Q8IZK6 566 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 RNF214Q8ND24 703 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 TTC17Q96AE7 1141 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 XPO4Q9C0E2 1151 aaKnown RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 DUSP15Q9H1R2 295 aaPredicted RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 SLC6A17Q9H1V8 727 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 TMEM245Q9H330 911 aa21.31■■□□□ 1
TRIM35-203ENST00000521253 KIAA1522Q9P206 1035 aaPredicted RBP21.31■■□□□ 1
TRIM35-203ENST00000521253 SIGLEC16A6NMB1 481 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 ZBTB24O43167 697 aaPredicted RBP21.3■■□□□ 1
TRIM35-203ENST00000521253 SYNCRIPO60506 623 aaKnown RBP21.3■■□□□ 1
TRIM35-203ENST00000521253 EPHX1P07099 455 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 HLA-EP13747 358 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 BCKDHBP21953 392 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 RRM1P23921 792 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 PTPN9P43378 593 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 MAP7D1Q3KQU3 841 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 C5orf22Q49AR2 442 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 PITRM1Q5JRX3 1037 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 WDR59Q6PJI9 974 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 FRMD1Q8N878 549 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 CPLX3Q8WVH0 158 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 MRGPRX1Q96LB2 322 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 DMXL1Q9Y485 3027 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 EML5Q05BV3 1969 aa21.3■■□□□ 1
TRIM35-203ENST00000521253 SDK1Q7Z5N4 2213 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 DDX3XO00571 662 aaKnown RBP eCLIP21.29■■□□□ 13e-12■■■■■ 30.5
TRIM35-203ENST00000521253 PLEKHG6Q3KR16 790 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 PPP1R15BQ5SWA1 713 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 CXorf57Q6NSI4 855 aaKnown RBP21.29■■□□□ 1
TRIM35-203ENST00000521253 PPP1R2P3Q6NXS1 205 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 C11orf74Q86VG3 221 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 DNAAF5Q86Y56 855 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 ZNF683Q8IZ20 524 aa21.29■■□□□ 1
TRIM35-203ENST00000521253 ZNF366Q8N895 744 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms