RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 NEUROG2Q9H2A3 272 aa17.06■□□□□ 0.32
TRAM1-204ENST00000521049 MTG2Q9H4K7 406 aa17.06■□□□□ 0.32
TRAM1-204ENST00000521049 KIAA1257Q9ULG3 409 aa17.06■□□□□ 0.32
TRAM1-204ENST00000521049 FZD4Q9ULV1 537 aa17.06■□□□□ 0.32
TRAM1-204ENST00000521049 GCN1Q92616 2671 aaKnown RBP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 KNTC1P50748 2209 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 NUMA1Q14980 2115 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 A0A1B0GVL5 298 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 A0A1W2PR77 199 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 TARSL2A2RTX5 802 aaKnown RBP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 RRP8O43159 456 aaKnown RBP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 MSI1O43347 362 aaKnown RBP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 ACSL4O60488 711 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 SIN3BO75182 1162 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 IGLV3-27P01718 113 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 MXI1P50539 228 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 DNAJC3Q13217 504 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 CST6Q15828 149 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
TRAM1-204ENST00000521049 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 NUGGCQ68CJ6 796 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 MSANTD2Q6P1R3 559 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 CACTIN-AS1Q8N1I8 211 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 OMDQ99983 421 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 GDF3Q9NR23 364 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 SERGEFQ9UGK8 458 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 MAPK8IP1Q9UQF2 711 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 HPSEQ9Y251 543 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 AK5Q9Y6K8 562 aa17.05■□□□□ 0.32
TRAM1-204ENST00000521049 A0A1W2PP55 124 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 MID1O15344 667 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 TLX3O43711 291 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-204ENST00000521049 RNASEH2AO75792 299 aaKnown RBP17.04■□□□□ 0.32
TRAM1-204ENST00000521049 PRB1P04280 392 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 SETSIPP0DME0 302 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 VDRP11473 427 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 PFKFB1P16118 471 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 SLC6A4P31645 630 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 RXRGP48443 463 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 ARRB1P49407 418 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-204ENST00000521049 ACADVLP49748 655 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 DAOAP59103 153 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 SEMG2Q02383 582 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 ILKQ13418 452 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 EID2Q8N6I1 236 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 UBA3Q8TBC4 463 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 IRGQQ8WZA9 623 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 MRGPRX3Q96LB0 322 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 DDX50Q9BQ39 737 aaKnown RBP17.04■□□□□ 0.32
TRAM1-204ENST00000521049 ERVMER34-1Q9H9K5 563 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 AASDHPPTQ9NRN7 309 aa17.04■□□□□ 0.32
TRAM1-204ENST00000521049 INTS6Q9UL03 887 aaKnown RBP17.04■□□□□ 0.32
TRAM1-204ENST00000521049 CBX4O00257 560 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 ZIC2O95409 532 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 SLC8A1P32418 973 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 CSKP41240 450 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 YWHAEP62258 255 aaKnown RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 DPYDQ12882 1025 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 SLC45A4Q5BKX6 768 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 MMAAQ8IVH4 418 aaKnown RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 HJURPQ8NCD3 748 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-204ENST00000521049 BAP1Q92560 729 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 FAM129BQ96TA1 746 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 STIM2Q9P246 746 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 COQ4Q9Y3A0 265 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 RAI2Q9Y5P3 530 aa17.03■□□□□ 0.32
TRAM1-204ENST00000521049 TLR4O00206 839 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 O00370 1275 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 WNT9AO14904 365 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 C1QL1O75973 258 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 LCP1P13796 627 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 CD19P15391 556 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 GOT1P17174 413 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 EPHA8P29322 1005 aaPredicted RBP17.02■□□□□ 0.32
TRAM1-204ENST00000521049 CLDN6P56747 220 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 TBX4P57082 545 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 NXPH1P58417 271 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 CUL2Q13617 745 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 HES3Q5TGS1 186 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 SND1Q7KZF4 910 aaKnown RBP eCLIP17.02■□□□□ 0.323e-8■□□□□ 10.8
TRAM1-204ENST00000521049 CCDC117Q8IWD4 279 aaPredicted RBP17.02■□□□□ 0.32
TRAM1-204ENST00000521049 OXR1Q8N573 874 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 SNIP1Q8TAD8 396 aaKnown RBP17.02■□□□□ 0.32
TRAM1-204ENST00000521049 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 FGF11Q92914 225 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 SERAC1Q96JX3 654 aa17.02■□□□□ 0.32
TRAM1-204ENST00000521049 ERVW-1Q9UQF0 538 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms