RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 NEU3Q9UQ49 428 aa17.96■□□□□ 0.47
TRAM1-203ENST00000520700 TBC1D30Q9Y2I9 924 aa17.96■□□□□ 0.47
TRAM1-203ENST00000520700 SNX10Q9Y5X0 201 aa17.96■□□□□ 0.47
TRAM1-203ENST00000520700 MACROD2A1Z1Q3 448 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 KRBA1A5PL33 1030 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF487B1APH4 448 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 PSTPIP1O43586 416 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 TULP3O75386 442 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 RHOQP17081 205 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 GALK1P51570 392 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 OXCT1P55809 520 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 PDK2Q15119 407 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 CA9Q16790 459 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 HS1BP3Q53T59 392 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 TRIM67Q6ZTA4 783 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 PYROXD2Q8N2H3 581 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 TTC8Q8TAM2 541 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 TBC1D31Q96DN5 1066 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 LMLNQ96KR4 655 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 PNKPQ96T60 521 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 P2RY13Q9BPV8 354 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 OSBPL6Q9BZF3 934 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 ZYG11BQ9C0D3 744 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 DHX35Q9H5Z1 703 aaKnown RBP17.95■□□□□ 0.46
TRAM1-203ENST00000520700 ZWILCHQ9H900 591 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 DONSONQ9NYP3 566 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 DEC1Q9P2X7 70 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF212Q9UDV6 495 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 GUCA1BQ9UMX6 200 aa17.95■□□□□ 0.46
TRAM1-203ENST00000520700 MRPS17Q9Y2R5 130 aaKnown RBP17.95■□□□□ 0.46
TRAM1-203ENST00000520700 SPOPO43791 374 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SRGAP2O75044 1071 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 LUC7L3O95232 432 aaKnown RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 MOCS3O95396 460 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SSR1P43307 286 aaKnown RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SLC6A11P48066 632 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SOX9P48436 509 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SLC12A1Q13621 1099 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 TMEM196Q5HYL7 178 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 KCNT1Q5JUK3 1230 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 TXNDC11Q6PKC3 985 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 TPRG1Q6ZUI0 275 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 SETD3Q86TU7 594 aaPredicted RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 NT5DC3Q86UY8 548 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 NLRP14Q86W24 1093 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 C12orf40Q86WS4 652 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 MAP7D3Q8IWC1 876 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 CCAR2Q8N163 923 aaKnown RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF687Q8N1G0 1237 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 CFAP52Q8N1V2 620 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 FAM3CQ92520 227 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 TSC1Q92574 1164 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 KCTD15Q96SI1 283 aaPredicted RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 LZTFL1Q9NQ48 299 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 GPATCH2LQ9NWQ4 482 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 DDX56Q9NY93 547 aaKnown RBP17.94■□□□□ 0.46
TRAM1-203ENST00000520700 PLK2Q9NYY3 685 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 MYOFQ9NZM1 2061 aa17.94■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 KANSL1LA0AUZ9 987 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 GOLGA6L9A6NEM1 432 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 TNFRSF10AO00220 468 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 FGF10O15520 208 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PALMO75781 387 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CNTN5O94779 1100 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 DRD1P21728 446 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 IL4RP24394 825 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CTNNA2P26232 953 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 GGCXP38435 758 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 GRIA2P42262 883 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 MAPKAPK2P49137 400 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 DGKGP49619 791 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PLK1P53350 603 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF177Q13360 481 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 ATP13A4Q4VNC1 1196 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 ALFQ53S48 1182 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 ZNF783Q6ZMS7 281 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 NUDT18Q6ZVK8 323 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CCDC117Q8IWD4 279 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 SIX5Q8N196 739 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 COL25A1Q9BXS0 654 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CATSPERBQ9H7T0 1116 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PRDM16Q9HAZ2 1276 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PCDH18Q9HCL0 1135 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 DNAJC17Q9NVM6 304 aaKnown RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 KIAA1522Q9P206 1035 aaPredicted RBP17.93■□□□□ 0.46
TRAM1-203ENST00000520700 STIM2Q9P246 746 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CA14Q9ULX7 337 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CLEC4EQ9ULY5 219 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PYCARDQ9ULZ3 195 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 PCDHA3Q9Y5H8 950 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.93■□□□□ 0.462e-7■■□□□ 12.9
TRAM1-203ENST00000520700 CAPN6Q9Y6Q1 641 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 TICRRQ7Z2Z1 1910 aa17.93■□□□□ 0.46
TRAM1-203ENST00000520700 CCDC66A2RUB6 948 aa17.92■□□□□ 0.46
TRAM1-203ENST00000520700 MIF4GDA9UHW6 222 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms