RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 PORCNQ9H237 461 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 PNPLA8Q9NP80 782 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 TBCCD1Q9NVR7 557 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 ISY1Q9ULR0 285 aaKnown RBP7.85□□□□□ -1.15
SDCBP-208ENST00000520228 GABRQQ9UN88 632 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 NAV1Q8NEY1 1877 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 FOCADQ5VW36 1801 aa7.85□□□□□ -1.15
SDCBP-208ENST00000520228 F5H697 171 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 VWA5AO00534 786 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 PROM1O43490 865 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 ZBED4O75132 1171 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 CYP21A2P08686 494 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 TACR2P21452 398 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 PXNP49023 591 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-208ENST00000520228 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-208ENST00000520228 LONRF1Q17RB8 773 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 RBM20Q5T481 1227 aaKnown RBP7.84□□□□□ -1.15
SDCBP-208ENST00000520228 Q6ZPA2 131 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 GPR142Q7Z601 462 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 SLC30A5Q8TAD4 765 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 CHURC1Q8WUH1 139 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 SPSB4Q96A44 273 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 TMEM47Q9BQJ4 181 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 UBAC1Q9BSL1 405 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 PTDSS2Q9BVG9 487 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 COLEC11Q9BWP8 271 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 MOV10L1Q9BXT6 1211 aaKnown RBP7.84□□□□□ -1.15
SDCBP-208ENST00000520228 LSG1Q9H089 658 aaKnown RBP7.84□□□□□ -1.15
SDCBP-208ENST00000520228 CHST8Q9H2A9 424 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 SYBUQ9NX95 663 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 FEM1BQ9UK73 627 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 GJD2Q9UKL4 321 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 ADAMTS5Q9UNA0 930 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 SHOC2Q9UQ13 582 aa7.84□□□□□ -1.15
SDCBP-208ENST00000520228 MYH1P12882 1939 aa7.84□□□□□ -1.16
SDCBP-208ENST00000520228 SLC15A5A6NIM6 579 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 RASA4BC9J798 803 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 TMEM232C9JQI7 657 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 E7EWF7 191 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 RASA4O43374 803 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 TRIAP1O43715 76 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 SLC25A27O95847 323 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 MT-ND5P03915 603 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 TXNP10599 105 aaKnown RBP7.83□□□□□ -1.16
SDCBP-208ENST00000520228 ITGAMP11215 1152 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 PPP3CBP16298 524 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 CYP2B6P20813 491 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 PPIFP30405 207 aaKnown RBP7.83□□□□□ -1.16
SDCBP-208ENST00000520228 LRPAP1P30533 357 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 PTPAQ15257 358 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 CCDC96Q2M329 555 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 PLA1AQ53H76 456 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 VWA1Q6PCB0 445 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 FAM160B2Q86V87 743 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 ULK2Q8IYT8 1036 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.83□□□□□ -1.16
SDCBP-208ENST00000520228 SOCS4Q8WXH5 440 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 LARP4BQ92615 738 aaKnown RBP7.83□□□□□ -1.16
SDCBP-208ENST00000520228 GJA10Q969M2 543 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 PTCD3Q96EY7 689 aaKnown RBP7.83□□□□□ -1.16
SDCBP-208ENST00000520228 ZNF333Q96JL9 665 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 SNX22Q96L94 193 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 NELL2Q99435 816 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 MROH8Q9H579 483 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 KAT14Q9H8E8 782 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 CDK5RAP2Q96SN8 1893 aa7.83□□□□□ -1.16
SDCBP-208ENST00000520228 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 POM121BA6NF01 834 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 STRNO43815 780 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 PLA2G6O60733 806 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 PARP1P09874 1014 aaKnown RBP7.82□□□□□ -1.16
SDCBP-208ENST00000520228 C6P13671 934 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 TGM1P22735 817 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 MCM7P33993 719 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 COPB2P35606 906 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 RGS2P41220 211 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 STAT2P52630 851 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 SOX10P56693 466 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 UBXN2AP68543 259 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 BLOC1S1P78537 153 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 SFRP4Q6FHJ7 346 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-208ENST00000520228 LAYNQ6UX15 382 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 DBX2Q6ZNG2 339 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 UNC13DQ70J99 1090 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 CYB5R4Q7L1T6 521 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 ENAHQ8N8S7 591 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-208ENST00000520228 NCOA7Q8NI08 942 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 USP6NLQ92738 828 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 ELAC2Q9BQ52 826 aaKnown RBP7.82□□□□□ -1.16
SDCBP-208ENST00000520228 TEX13BQ9BXU2 312 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 SLC38A10Q9HBR0 1119 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 STARD7Q9NQZ5 370 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 KCTD5Q9NXV2 234 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 SSX2IPQ9Y2D8 614 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 TBC1D30Q9Y2I9 924 aa7.82□□□□□ -1.16
SDCBP-208ENST00000520228 PHIPQ8WWQ0 1821 aa7.81□□□□□ -1.16
SDCBP-208ENST00000520228 ERICH2A1L162 156 aa7.81□□□□□ -1.16
SDCBP-208ENST00000520228 GRID2IPA4D2P6 1211 aa7.81□□□□□ -1.16
SDCBP-208ENST00000520228 IFIT3O14879 490 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms