RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 RNF34Q969K3 372 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 SIPA1Q96FS4 1042 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
MCPH1-202ENST00000519221 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
MCPH1-202ENST00000519221 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
MCPH1-202ENST00000519221 PILRBQ9UKJ0 227 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
MCPH1-202ENST00000519221 LNP1A1A4G5 178 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 H0Y626 953 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NDUFS2O75306 463 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 GRAP2O75791 330 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 F9P00740 461 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ACADMP11310 421 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 CDK11BP21127 795 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 CD6P30203 668 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 SOX5P35711 763 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 COPAP53621 1224 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 JAM2P57087 298 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 POLR2FP61218 127 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ST8SIA6P61647 398 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 TYRO3Q06418 890 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ZNF33AQ06730 810 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 PTPRNQ16849 979 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 TCEAL6Q6IPX3 200 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 TRIM72Q6ZMU5 477 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ARCQ7LC44 396 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 CARNMT1Q8N4J0 409 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 CYB5D2Q8WUJ1 264 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 TCEAL3Q969E4 200 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 MYEOVQ96EZ4 313 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ZNF419Q96HQ0 510 aaPredicted RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 ERGIC2Q96RQ1 377 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NPY6RQ99463 290 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 RXFP3Q9NSD7 469 aa13.16□□□□□ -0.3
MCPH1-202ENST00000519221 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 WSB2Q9NYS7 404 aaPredicted RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
MCPH1-202ENST00000519221 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 M0QYT0 321 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 TM4SF5O14894 197 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SRPRAP08240 638 aaKnown RBP13.15□□□□□ -0.3
MCPH1-202ENST00000519221 MMEP08473 750 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 HLA-EP13747 358 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 ITPKAP23677 461 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 CSKP41240 450 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 STAT1P42224 750 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 TPMTP51580 245 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 NOMO3P69849 1222 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 CDR2Q01850 454 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 NME3Q13232 169 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 NCAPHQ15003 741 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SYCP1Q15431 976 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 DUOXA1Q1HG43 343 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SYCP2LQ5T4T6 812 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.3
MCPH1-202ENST00000519221 ARMCX6Q7L4S7 300 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 BPIFA3Q9BQP9 254 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SLC6A17Q9H1V8 727 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 INTS6Q9UL03 887 aaKnown RBP13.15□□□□□ -0.3
MCPH1-202ENST00000519221 ACACBO00763 2458 aa13.15□□□□□ -0.3
MCPH1-202ENST00000519221 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 GFPT2O94808 682 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
MCPH1-202ENST00000519221 SERPINF2P08697 491 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 CXCR3P49682 368 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 KLK7P49862 253 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 PLK1P53350 603 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 IRX4P78413 519 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 UBXN1Q04323 297 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 SULT2A1Q06520 285 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
MCPH1-202ENST00000519221 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms