RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PRR16Q569H4 304 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 KCTD8Q6ZWB6 473 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 STXBP4Q6ZWJ1 553 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 SLC38A6Q8IZM9 456 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 TP53INP1Q96A56 240 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 STRA6Q9BX79 667 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 FBXO9Q9UK97 447 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 ZNF335Q9H4Z2 1342 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 NUAK1O60285 661 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 UFL1O94874 794 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 KCNH1O95259 989 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CRYZL1O95825 349 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 SERPINE1P05121 402 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 KLRK1P26718 216 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 HSPA1LP34931 641 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CDK8P49336 464 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CLK3P49761 638 aaKnown RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 TMBIM6P55061 237 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 TSPY1Q01534 308 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CHRNEQ04844 493 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 SLC9B1Q4ZJI4 515 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 TXNRD3NBQ6F5E7 133 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 FAM156AQ8NDB6 213 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 ABHD11Q8NFV4 315 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 LENG9Q96B70 501 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 RCN3Q96D15 328 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 EIF2AK1Q9BQI3 630 aaKnown RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 C11orf70Q9BRQ4 267 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 PLAC1Q9HBJ0 212 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 SMOXQ9NWM0 555 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 GPSM3Q9Y4H4 160 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 DLGAP1O14490 977 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 SOCS2O14508 198 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CSH1P0DML2 217 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CSH2P0DML3 217 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 PRKACBP22694 351 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 GLDCP23378 1020 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 GRK2P25098 689 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CDKN2BP42772 138 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 NSFP46459 744 aaKnown RBP13.87□□□□□ -0.19
PABPC1-208ENST00000519004 BASP1P80723 227 aaKnown RBP13.87□□□□□ -0.19
PABPC1-208ENST00000519004 ASPRV1Q53RT3 343 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 KCNT2Q6UVM3 1135 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 EPGNQ6UW88 154 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 GRAMD2AQ8IUY3 354 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 ADGRF4Q8IZF3 695 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 SLCO4A1Q96BD0 722 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 FEM1CQ96JP0 617 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CLSTN3Q9BQT9 956 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CBWD1Q9BRT8 395 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
PABPC1-208ENST00000519004 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 DDX60LQ5H9U9 1706 aaKnown RBP13.87□□□□□ -0.19
PABPC1-208ENST00000519004 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
PABPC1-208ENST00000519004 CDK5RAP2Q96SN8 1893 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 RGSL1A5PLK6 1076 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ZBTB39O15060 712 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
PABPC1-208ENST00000519004 HOXC11O43248 304 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-208ENST00000519004 SCO2O43819 266 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 AVILO75366 819 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 KRT5P13647 590 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ENO3P13929 434 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-208ENST00000519004 PRKCAP17252 672 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 CKMT2P17540 419 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 PRKCHP24723 683 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 DSG3P32926 999 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 PCLAFQ15004 111 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TFDP3Q5H9I0 405 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ODR4Q5SWX8 454 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 PPP4R4Q6NUP7 873 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 MOXD1Q6UVY6 613 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ESX1Q8N693 406 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ACTL9Q8TC94 416 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ACO2Q99798 780 aaKnown RBP13.86□□□□□ -0.19
PABPC1-208ENST00000519004 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 RETREG1Q9H6L5 497 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 WDR41Q9HAD4 459 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 AKIP1Q9NQ31 210 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 SNX13Q9Y5W8 968 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 KAT6AQ92794 2004 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ICMTO60725 284 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TCN1P20061 433 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms