RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PPP1R2P1Q96PQ5 205 aa6.82□□□□□ -1.32
CPNE3-203ENST00000517490 SDCBP2Q9H190 292 aa6.82□□□□□ -1.32
CPNE3-203ENST00000517490 PREBQ9HCU5 417 aa6.82□□□□□ -1.32
CPNE3-203ENST00000517490 IARS2Q9NSE4 1012 aaKnown RBP6.82□□□□□ -1.32
CPNE3-203ENST00000517490 COPG2Q9UBF2 871 aa6.82□□□□□ -1.32
CPNE3-203ENST00000517490 VANGL2Q9ULK5 521 aa6.82□□□□□ -1.32
CPNE3-203ENST00000517490 BARX2Q9UMQ3 279 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-203ENST00000517490 FARP1Q9Y4F1 1045 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-203ENST00000517490 BCLAF3A2AJT9 711 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 E7ESA3 106 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PDLIM1O00151 329 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ADCY6O43306 1168 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PLIN3O60664 434 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 MLNP12872 115 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 RAB15P59190 212 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 YWHAHQ04917 246 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 GRM1Q13255 1194 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SLC12A1Q13621 1099 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ADGRE1Q14246 886 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 KCTD2Q14681 263 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PTPN20Q4JDL3 420 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TBCELQ5QJ74 424 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 C1orf220Q5T0J3 134 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PRMT9Q6P2P2 845 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TTC30AQ86WT1 665 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CAMK1DQ8IU85 385 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 DDIASQ8IXT1 998 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF555Q8NEP9 628 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ZSCAN18Q8TBC5 510 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 NRG4Q8WWG1 115 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 BSNDQ8WZ55 320 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 RCN3Q96D15 328 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ATG4CQ96DT6 458 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF668Q96K58 619 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 EBF4Q9BQW3 602 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 C9orf16Q9BUW7 83 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 MAGEB5Q9BZ81 275 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SEMA6AQ9H2E6 1030 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ARHGEF38Q9NXL2 777 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ARHGAP28Q9P2N2 729 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 COL22A1Q8NFW1 1626 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SAC3D1A6NKF1 404 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ZBBXA8MT70 800 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 KPNA4O00629 521 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ADSLP30566 484 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 MLH1P40692 756 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PSME3P61289 254 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 DLG1Q12959 904 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SHROOM1Q2M3G4 852 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 ANO4Q32M45 955 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SFT2D3Q587I9 215 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 DACT2Q5SW24 774 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 STXBP5Q5T5C0 1151 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 KLHDC10Q6PID8 442 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 USP6NLQ92738 828 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CERS2Q96G23 380 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 VPS50Q96JG6 964 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PPP1R16BQ96T49 567 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SLC25A23Q9BV35 468 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 STRA6Q9BX79 667 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC90BQ9GZT6 254 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM39BQ9GZU3 492 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 APOBEC3GQ9HC16 384 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 MAN1C1Q9NR34 630 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PACSIN3Q9UKS6 424 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 GJA3Q9Y6H8 435 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SPDYE2BA6NHP3 402 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CLOCKO15516 846 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TBC1D4O60343 1298 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 HUS1O60921 280 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 RNASEH1O60930 286 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 BCL10O95999 233 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SPDYE6P0CI01 402 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 GLRBP48167 497 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 FASTKQ14296 549 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 NADK2Q4G0N4 442 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 RWDD4Q6NW29 188 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 PGAM4Q8N0Y7 254 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TMCO5AQ8N6Q1 288 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CASP10Q92851 521 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 BORCS5Q969J3 196 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 WRNIP1Q96S55 665 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC106Q9BWC9 280 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 UBE2OQ9C0C9 1292 aaKnown RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SIRPGQ9P1W8 387 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TSPAN16Q9UKR8 245 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 SLC8A2Q9UPR5 921 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TEX264Q9Y6I9 313 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 NUP98P52948 1817 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TCRBV7S3A2A0A539 114 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 RNF103O00237 685 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 MRASO14807 208 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 TPST1O60507 370 aa6.81□□□□□ -1.32
CPNE3-203ENST00000517490 E2F6O75461 281 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms