RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 NUCB2P80303 420 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SCAPQ12770 1279 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KIF19Q2TAC6 998 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 HNRNPA1L2Q32P51 320 aaKnown RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KIAA0895LQ68EN5 471 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 NADSYN1Q6IA69 706 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TTI2Q6NXR4 508 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ADAT2Q7Z6V5 191 aaKnown RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SLCO6A1Q86UG4 719 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PNPLA1Q8N8W4 532 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RHBDD1Q8TEB9 315 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 GANCQ8TET4 914 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 STK32AQ8WU08 396 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ERCC4Q92889 916 aaPredicted RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KAT5Q92993 513 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LMLNQ96KR4 655 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CCDC86Q9H6F5 360 aaKnown RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LHX6Q9UPM6 363 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SNX11Q9Y5W9 270 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PTPRBP23467 1997 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TMEM131Q92545 1883 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 NYNRINQ9P2P1 1898 aaKnown RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TP53BP1Q12888 1972 aaPredicted RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PAPSS1O43252 624 aaPredicted RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MED7O43513 233 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PCDHGA12O60330 932 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 DKK1O94907 266 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CAPNS1P04632 268 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SRPRAP08240 638 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RPL34P49207 117 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RPS24P62847 133 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MS4A13Q5J8X5 152 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KLHL10Q6JEL2 608 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ARHGEF19Q8IW93 802 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CARNMT1Q8N4J0 409 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SKA1Q96BD8 255 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MYO19Q96H55 970 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SLC39A13Q96H72 371 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 NUCKS1Q9H1E3 243 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ST7Q9NRC1 585 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 FZD4Q9ULV1 537 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TPX2Q9ULW0 747 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CNTN6Q9UQ52 1028 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SLCO1B1Q9Y6L6 691 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PLXNB3Q9ULL4 1909 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 DSPP15924 2871 aaKnown RBP15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ITIH6Q6UXX5 1313 aa15.13■□□□□ 0.01
SCARNA20.5-201ENST00000516991 APC2O95996 2303 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 EDDM13A0A1B0GTR0 161 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TARSL2A2RTX5 802 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LRRC72A6NJI9 287 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CAPN9O14815 690 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SIN3BO75182 1162 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LUC7L3O95232 432 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MOCS2O96007 188 aaPredicted RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 FYNP06241 537 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KRT5P13647 590 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CTSKP43235 329 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 GPD2P43304 727 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MARSP56192 900 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 C21orf59P57076 290 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RACK1P63244 317 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 BECN1Q14457 450 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CST6Q15828 149 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 PITRM1Q5JRX3 1037 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RNF219Q5W0B1 726 aaPredicted RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TMPRSS7Q7RTY8 843 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TAC4Q86UU9 113 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 GALNT15Q8N3T1 639 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 EHBP1Q8NDI1 1231 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 NELFBQ8WX92 580 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MRGPRX3Q96LB0 322 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ACE2Q9BYF1 805 aaPredicted RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 INTS2Q9H0H0 1204 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 FBXL12Q9NXK8 326 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TJP2Q9UDY2 1190 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 INTS6Q9UL03 887 aaKnown RBP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ERVW-1Q9UQF0 538 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 FREM2Q5SZK8 3169 aa15.12■□□□□ 0.01
SCARNA20.5-201ENST00000516991 A0A1W2PPC4 97 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 VILLO15195 856 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TNFSF14O43557 240 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 AFPP02771 609 aaKnown RBP15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 IGHV4-34P06331 123 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ATXN1LP0C7T5 689 aaKnown RBP15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 KCNH2Q12809 1159 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 SLC12A1Q13621 1099 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 DCAF6Q58WW2 860 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 TTC39BQ5VTQ0 682 aaPredicted RBP15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 LRSAM1Q6UWE0 723 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 ENOSF1Q7L5Y1 443 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CHSY1Q86X52 802 aa15.11■□□□□ 0.01
SCARNA20.5-201ENST00000516991 DHX40Q8IX18 779 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms