RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 DUSP10Q9Y6W6 482 aa5.62□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RCCD1A6NED2 376 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ARHGAP42A6NI28 874 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SPECC1L-ADORA2AF8WAN1 911 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 HOXC11O43248 304 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NARSO43776 548 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RAMP2O60895 175 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ATG13O75143 517 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 LUC7L3O95232 432 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FTCDO95954 541 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DRD1P21728 446 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GJA4P35212 333 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GGCXP38435 758 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 EIF2DP41214 584 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GRIA2P42262 883 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 HCAR3P49019 387 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MAPKAPK2P49137 400 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GEMIN4P57678 1058 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 COPS2P61201 443 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RPS24P62847 133 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZXDAP98168 799 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZXDBP98169 803 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NRG1Q02297 640 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SULT2A1Q06520 285 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SIGLEC14Q08ET2 396 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DMC1Q14565 340 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 POLD3Q15054 466 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DGKKQ5KSL6 1271 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KAZNQ674X7 775 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 C2orf16Q68DN1 1984 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NADSYN1Q6IA69 706 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TMCO3Q6UWJ1 677 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RFX8Q6ZV50 586 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CHST9Q7L1S5 443 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TRMT11Q7Z4G4 463 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ANKS1BQ7Z6G8 1248 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TFAP2DQ7Z6R9 452 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SETD3Q86TU7 594 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 AHI1Q8N157 1196 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CCAR2Q8N163 923 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 BBS5Q8N3I7 341 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 LZTR1Q8N653 840 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FLCNQ8NFG4 579 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 EDAQ92838 391 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 WBP2Q969T9 261 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RNF25Q96BH1 459 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NECAB3Q96P71 396 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 LRRC3BQ96PB8 259 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KCTD15Q96SI1 283 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 C2orf49Q9BVC5 232 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CIPCQ9C0C6 399 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KCNF1Q9H3M0 494 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 HPS4Q9NQG7 708 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ABCB8Q9NUT2 735 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KLHL11Q9NVR0 708 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MPP6Q9NZW5 540 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MARK1Q9P0L2 795 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RCOR3Q9P2K3 495 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PPARGC1AQ9UBK2 798 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DNAI1Q9UI46 699 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SLC25A13Q9UJS0 675 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 STOML2Q9UJZ1 356 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 VPS28Q9UK41 221 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NDRG2Q9UN36 371 aaKnown RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 JRKLQ9Y4A0 524 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FARP1Q9Y4F1 1045 aaPredicted RBP5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SNX10Q9Y5X0 201 aa5.61□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZNF638Q14966 1978 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GREB1Q4ZG55 1949 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ILVBLA1L0T0 632 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GRID2IPA4D2P6 1211 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CTAGE9A4FU28 777 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FAM170BA6NMN3 283 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DRGXA6NNA5 263 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PI4K2BG5E9Z4 385 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KIF2AO00139 706 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TNFRSF10AO00220 468 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DFFAO00273 331 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KCNK3O14649 394 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 APOL1O14791 398 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CACNG3O60359 315 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SYNCRIPO60506 623 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TULP3O75386 442 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZNF189O75820 626 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 LRIG2O94898 1065 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TJP3O95049 919 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KAT7O95251 611 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PENKP01210 267 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TUBB4AP04350 444 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ASLP04424 464 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PABPC1P11940 636 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GOT1P17174 413 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ERCC2P18074 760 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MX2P20592 715 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KDELR1P24390 212 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CASQ1P31415 396 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SLC6A4P31645 630 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CTHP32929 405 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms