RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	PLEKHH1	Q9ULM0	1364 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	MON2	Q7Z3U7	1717 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	C2CD4B	A6NLJ0	364 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	RRH	O14718	337 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	PLAU	P00749	431 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	PEX2	P28328	305 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	HTR7	P34969	479 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	NANOS2	P60321	138 aa	Known RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	WDR5	P61964	334 aa	Known RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	NFE2	Q16621	373 aa	Predicted RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	SRGAP1	Q7Z6B7	1085 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	MMP21	Q8N119	569 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	ACRBP	Q8NEB7	543 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	TRMT61A	Q96FX7	289 aa	Known RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	FCRL5	Q96RD9	977 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	TESK2	Q96S53	571 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	SELENOO	Q9BVL4	669 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	VPS45	Q9NRW7	570 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	TBC1D23	Q9NUY8	699 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	GOLGB1	Q14789	3259 aa	Known RBP	5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	PIK3C2A	O00443	1686 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	ADCY9	O60503	1353 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM90A8P	A6NJQ4	464 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	TPP1	O14773	563 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	WDR47	O94967	919 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	ZBED1	O96006	694 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	MT-ND5	P03915	603 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	S100B	P04271	92 aa	Predicted RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM90A13P	P0C7W8	464 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM90A24P	P0C7X0	464 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM193A	P78312	1265 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	RAE1	P78406	368 aa	Known RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	SEMA3A	Q14563	771 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	PLEKHG6	Q3KR16	790 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	DAB2IP	Q5VWQ8	1189 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	TOM1L2	Q6ZVM7	507 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	MEPCE	Q7L2J0	689 aa	Known RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	SDR16C5	Q8N3Y7	309 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	PRR11	Q96HE9	360 aa	Predicted RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	MSLNL	Q96KJ4	702 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	LYZL4	Q96KX0	146 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	SNX22	Q96L94	193 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	SAP30L	Q9HAJ7	183 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	ZBTB40	Q9NUA8	1239 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	TMEM45A	Q9NWC5	275 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	WWOX	Q9NZC7	414 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	CAPN11	Q9UMQ6	739 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	LRP12	Q9Y561	859 aa		5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	COL5A2	P05997	1499 aa	Predicted RBP	5.17	□□□□□ -1.58
RUFY3-215	ENST00000515479	COL15A1	P39059	1388 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	BTAF1	O14981	1849 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	PAPPA	Q13219	1627 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	USP12	O75317	370 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	MBP	P02686	304 aa	Predicted RBP	5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	EARS2	Q5JPH6	523 aa	Known RBP	5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	LVRN	Q6Q4G3	990 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	WIPF2	Q8TF74	440 aa	Predicted RBP	5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	PIGK	Q92643	395 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	NLRP4	Q96MN2	994 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	PRAM1	Q96QH2	718 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	SLC25A32	Q9H2D1	315 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	SEMA4B	Q9NPR2	832 aa	Predicted RBP	5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	VPS4A	Q9UN37	437 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	RNF123	Q5XPI4	1314 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	ADGRF5	Q8IZF2	1346 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	NPC1L1	Q9UHC9	1359 aa		5.16	□□□□□ -1.58
RUFY3-215	ENST00000515479	DLG5	Q8TDM6	1919 aa		5.15	□□□□□ -1.58
RUFY3-215	ENST00000515479	TTC3	P53804	2025 aa		5.15	□□□□□ -1.58
RUFY3-215	ENST00000515479	IGLV5-39	A0A0G2JS06	123 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	VSTM5	A8MXK1	200 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	HRG	P04196	525 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	B4GALNT1	Q00973	533 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	MTAP	Q13126	283 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	MTA1	Q13330	715 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	DNASE1L3	Q13609	305 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	GRM3	Q14832	879 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	CNGA3	Q16281	694 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	ZNF549	Q6P9A3	640 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	FAM57B	Q71RH2	274 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	RNF44	Q7L0R7	432 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	TFAP2D	Q7Z6R9	452 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	JDP2	Q8WYK2	163 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	FAM227B	Q96M60	508 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	KRTAP2-2	Q9BYT5	123 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	HIPK2	Q9H2X6	1198 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	AS3MT	Q9HBK9	375 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	MLXIPL	Q9NP71	852 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	HEYL	Q9NQ87	328 aa	Predicted RBP	5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	SEMA5B	Q9P283	1151 aa		5.15	□□□□□ -1.59
RUFY3-215	ENST00000515479	TUBGCP6	Q96RT7	1819 aa		5.14	□□□□□ -1.59
RUFY3-215	ENST00000515479	SLC22A23	A1A5C7	686 aa		5.14	□□□□□ -1.59
RUFY3-215	ENST00000515479	TNFRSF1B	P20333	461 aa		5.14	□□□□□ -1.59
RUFY3-215	ENST00000515479	RPS6KB1	P23443	525 aa		5.14	□□□□□ -1.59
RUFY3-215	ENST00000515479	HOXA7	P31268	230 aa	Predicted RBP	5.14	□□□□□ -1.59
RUFY3-215	ENST00000515479	VPS41	P49754	854 aa		5.14	□□□□□ -1.59

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