RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GTSE1Q9NYZ3 720 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 MARK1Q9P0L2 795 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 TRIM10Q9UDY6 481 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 PCSK1NQ9UHG2 260 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 GUCA1BQ9UMX6 200 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 HS3ST4Q9Y661 456 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 CAPN6Q9Y6Q1 641 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 DUSP10Q9Y6W6 482 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 KMT2EQ8IZD2 1858 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 IGLV3-10A0A075B6K4 115 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 A0A1B0GVM2 712 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 GRID2IPA4D2P6 1211 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TCAF2A6NFQ2 919 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 E9PAM4 449 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 NEDD8-MDP1E9PL57 170 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 HOXC11O43248 304 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 PSTPIP1O43586 416 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 CACNG3O60359 315 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 MOCS3O95396 460 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 PENKP01210 267 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ADH5P11766 374 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TCF4P15884 667 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 COMTP21964 271 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 IL1R2P27930 398 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 L1CAMP32004 1257 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 HTR7P34969 479 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 GJA4P35212 333 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 GJC1P36383 396 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 GGCXP38435 758 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 EIF2DP41214 584 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 MLLT6P55198 1093 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TAS2R40P59535 323 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 AMPD2Q01433 879 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TNK2Q07912 1038 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 SEMA3BQ13214 749 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 AUHQ13825 339 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 DPYSL2Q16555 572 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 SMTNL2Q2TAL5 461 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ANO4Q32M45 955 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 C5orf22Q49AR2 442 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 BOLA3Q53S33 107 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 HS1BP3Q53T59 392 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 MANEALQ5VSG8 457 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 LRRC38Q5VT99 294 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 FYB2Q5VWT5 728 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RFWD3Q6PCD5 774 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RHBDF2Q6PJF5 856 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 LRRC31Q6UY01 552 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TPGS1Q6ZTW0 290 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RALGPS2Q86X27 583 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TMEM25Q86YD3 366 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RHOT1Q8IXI2 618 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 LGI2Q8N0V4 545 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF557Q8N988 423 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 LRRC57Q8N9N7 239 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TRIM58Q8NG06 486 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 KIAA1524Q8TCG1 905 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 UBE2Q2Q8WVN8 375 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 EXOC4Q96A65 974 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TRIM44Q96DX7 344 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TMA16Q96EY4 203 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 PRICKLE1Q96MT3 831 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RPRD1AQ96P16 312 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 NECAB3Q96P71 396 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ALS2CR12Q96Q35 445 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 SIK2Q9H0K1 926 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 GOLPH3Q9H4A6 298 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 DHX35Q9H5Z1 703 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 RETREG1Q9H6L5 497 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 C8orf33Q9H7E9 229 aaPredicted RBP7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ZWILCHQ9H900 591 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 CD320Q9NPF0 282 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TMPRSS4Q9NRS4 437 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 HEBP1Q9NRV9 189 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 OR12D3Q9UGF7 316 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 MUTYHQ9UIF7 546 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 VANGL2Q9ULK5 521 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 PYCARDQ9ULZ3 195 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 ALG6Q9Y672 507 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 CEP192Q8TEP8 1941 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TRIOO75962 3097 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 TTC28Q96AY4 2481 aa7.83□□□□□ -1.16
HMGXB3-204ENST00000513318 EML5Q05BV3 1969 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 GOLGA6L7A0A1B0GV03 622 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 CCDC66A2RUB6 948 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 OTOL1A6NHN0 477 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 MIF4GDA9UHW6 222 aaKnown RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TRDMT1O14717 391 aaKnown RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TSPAN3O60637 253 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TBL1XO60907 577 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PALMO75781 387 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 LRIG2O94898 1065 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 ADH1BP00325 375 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 RARAP10276 462 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TYRP14679 529 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 GLULP15104 373 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 HOXD9P28356 352 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 HOXC13P31276 330 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms