RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TGFB2P61812 414 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 HOXA4Q00056 320 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 EZH2Q15910 746 aaKnown RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 CNGA3Q16281 694 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 CYP1B1Q16678 543 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 PFKFB3Q16875 520 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 STRIP1Q5VSL9 837 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 WDR93Q6P2C0 686 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 TRIM72Q6ZMU5 477 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 C12orf76Q8N812 135 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 TERB1Q8NA31 727 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 OTUD7AQ8TE49 926 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 SLC22A17Q8WUG5 538 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 PYM1Q9BRP8 204 aaKnown RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 FSD1LQ9BXM9 530 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 NOD2Q9HC29 1040 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 ARL8BQ9NVJ2 186 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 LPAR3Q9UBY5 353 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 ZNHIT2Q9UHR6 403 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 SCAF8Q9UPN6 1271 aaKnown RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 INSL6Q9Y581 213 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 PCDHB7Q9Y5E2 793 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 RGPD8O14715 1765 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 USP6P35125 1406 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 A0A087X1B8 175 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 ZNF213O14771 459 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 FOXN1O15353 648 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 SUV39H1O43463 412 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 SPRY2O43597 315 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 TAF5LO75529 589 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 RPP40O75818 363 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 TJP3O95049 919 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 C1RP00736 705 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 ALDOAP04075 364 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 ELFN1P0C7U0 828 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 TNFRSF1AP19438 455 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 DRD4P21917 467 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 HTR7P34969 479 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 ADRA1BP35368 520 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 MCM2P49736 904 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 RARRES1P49788 294 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 GOLGA8FQ08AF8 430 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 LMAN2Q12907 356 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 FOXI1Q12951 378 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 RRS1Q15050 365 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 GLE1Q53GS7 698 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 ALFQ53S48 1182 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 SYNE3Q6ZMZ3 975 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 TMEM57Q8N5G2 664 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.72□□□□□ -1.65
HTT-210ENST00000512909 OR52L2PQ8NGH6 319 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 NOC3LQ8WTT2 800 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 UROC1Q96N76 676 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 WDR24Q96S15 920 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 TESK2Q96S53 571 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 MMS19Q96T76 1030 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 PABPC3Q9H361 631 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 PANK3Q9H999 370 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 MLXIPQ9HAP2 919 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 PRDM16Q9HAZ2 1276 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 ALG13Q9NP73 1137 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 GABRQQ9UN88 632 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 PCDHGB3Q9Y5G1 929 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 HEMK1Q9Y5R4 338 aaPredicted RBP4.72□□□□□ -1.65
HTT-210ENST00000512909 USP47Q96K76 1375 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 ATP7BP35670 1465 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 KIF1AQ12756 1690 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 KNDC1Q76NI1 1749 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 SLIT2O94813 1529 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 CLSPNQ9HAW4 1339 aa4.72□□□□□ -1.65
HTT-210ENST00000512909 CDK12Q9NYV4 1490 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 BRD4O60885 1362 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 GRID2IPA4D2P6 1211 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 E7EVH7 732 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 H0Y3Z8 333 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 SMIM22K7EJ46 135 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 IPO5O00410 1097 aaKnown RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 FYB1O15117 783 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 CTIFO43310 598 aaKnown RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 USP12O75317 370 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ALADP13716 330 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 XBP1P17861 261 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 SLC8A1P32418 973 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 VPS41P49754 854 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 DIO1P49895 249 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 CACNA2D1P54289 1103 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 ACTR2P61160 394 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 SIM1P81133 766 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 SLC12A1Q13621 1099 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 KCNJ12Q14500 433 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 KCNB1Q14721 858 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 AASDHQ4L235 1098 aaPredicted RBP4.71□□□□□ -1.66
HTT-210ENST00000512909 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 TANGO2Q6ICL3 276 aa4.71□□□□□ -1.66
HTT-210ENST00000512909 JMJD6Q6NYC1 403 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms