RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CBX6O95503 412 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TGFB2P61812 414 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 XRCC4Q13426 336 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ZSWIM2Q8NEG5 633 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 FAM192AQ9GZU8 254 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 CACNA2D2Q9NY47 1150 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 MYRFQ9Y2G1 1151 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PDZK1P1A8MUH7 402 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 F8VP50 259 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TRIM24O15164 1050 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 URODP06132 367 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ELF3P78545 371 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 IL5RAQ01344 420 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 FRG1Q14331 258 aaKnown RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TCHHL1Q5QJ38 904 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ARHGAP17Q68EM7 881 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF184Q99676 751 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PORCNQ9H237 461 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 INPP4BO15327 924 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 BCL10O95999 233 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 NUDT17P0C025 328 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 MYL4P12829 197 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 MSH3P20585 1137 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 CYP2A7P20853 494 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 POU1F1P28069 291 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TGM3Q08188 693 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 SLC44A2Q8IWA5 706 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 FAM71AQ8IYT1 594 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ADAM30Q9UKF2 790 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 MAP2P11137 1827 aaKnown RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CCDC154A6NI56 674 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 DCXO43602 365 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ETS1P14921 441 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CYP2C18P33260 490 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PIK3CGP48736 1102 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 RPL14P50914 215 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 MAMLD1Q13495 774 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 FNDC5Q8NAU1 212 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 SLC2A14Q8TDB8 520 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CDRT15Q96T59 188 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 APBA2Q99767 749 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CEP41Q9BYV8 373 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 E5RJQ4 531 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 KCNK1O00180 336 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PSMD10O75832 226 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ALDH2P05091 517 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 MLH1P40692 756 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CDH8P55286 799 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 IL22Q9GZX6 179 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 GAKO14976 1311 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 DCCP43146 1447 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CASTOR2A6NHX0 329 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 CCNT2O60583 730 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 MT-CO1P00395 513 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 C4BPBP20851 252 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PPP2R1BP30154 601 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 RAB14P61106 215 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PWP1Q13610 501 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 APOBEC3HQ6NTF7 200 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PIWIL2Q8TC59 973 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 SEPHS2Q99611 448 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ARMCX1Q9P291 453 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PXDNQ92626 1479 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 PSMG1O95456 288 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF286BP0CG31 522 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 OR1E1P30953 314 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 RPA3P35244 121 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
COL11A1-210ENST00000512756 ADAM28Q9UKQ2 775 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms