RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 GSTO2Q9H4Y5 243 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 LTB4R2Q9NPC1 389 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 HOMER2Q9NSB8 354 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 ANKMY1Q9P2S6 941 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA9Q9Y5G4 932 aaKnown RBP6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA8Q9Y5G5 932 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA7Q9Y5G6 932 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA6Q9Y5G7 932 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA3Q9Y5H0 932 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 COL5A1P20908 1838 aaPredicted RBP6.19□□□□□ -1.42
GYPB-212ENST00000511198 COL6A6A6NMZ7 2263 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 A0A087WV48 116 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 SPAARA0A1B0GVQ0 90 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 TCRBV7S2A1N4TA0A589 114 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 HAS3O00219 553 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 NDUFS2O75306 463 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 NUDT3O95989 172 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 EPCAMP16422 314 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 C5AR1P21730 350 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 HOXC13P31276 330 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 MPLP40238 635 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 RPS9P46781 194 aaKnown RBP6.18□□□□□ -1.42
GYPB-212ENST00000511198 CLK3P49761 638 aaKnown RBP6.18□□□□□ -1.42
GYPB-212ENST00000511198 CSRP3P50461 194 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 TIMM10P62072 90 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 CXADRP78310 365 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 HSD11B2P80365 405 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 NONOQ15233 471 aaKnown RBP eCLIP6.18□□□□□ -1.42
GYPB-212ENST00000511198 SPDYE7PQ495Y7 208 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 SLC44A4Q53GD3 710 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 RASGRP2Q7LDG7 609 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 RHOT1Q8IXI2 618 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 DCBLD1Q8N8Z6 715 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 RPP25Q9BUL9 199 aaKnown RBP6.18□□□□□ -1.42
GYPB-212ENST00000511198 PRORYQ9H606 182 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 SLC38A10Q9HBR0 1119 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 ENTPD7Q9NQZ7 604 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 ZNHIT2Q9UHR6 403 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 NOX1Q9Y5S8 564 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 PLXNB3Q9ULL4 1909 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 CACNA1FO60840 1977 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 C2orf16Q68DN1 1984 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 CSMD1Q96PZ7 3565 aa6.18□□□□□ -1.42
GYPB-212ENST00000511198 CENPEQ02224 2701 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 SHISA7A6NL88 538 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 ZAR1LA6NP61 321 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 ZBED4O75132 1171 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 PPFIA2O75334 1257 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 ARIH2O95376 493 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 ESRRBO95718 433 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 ALAS1P13196 640 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 EEF2P13639 858 aaKnown RBP6.17□□□□□ -1.42
GYPB-212ENST00000511198 CDKN1CP49918 316 aaPredicted RBP6.17□□□□□ -1.42
GYPB-212ENST00000511198 CTXN1P60606 82 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 NOMO3P69849 1222 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 TARDBPQ13148 414 aaKnown RBP eCLIP6.17□□□□□ -1.42
GYPB-212ENST00000511198 KIAA0753Q2KHM9 967 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 LETM2Q2VYF4 491 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 NOMO2Q5JPE7 1267 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 SYDE2Q5VT97 1194 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 DAB2IPQ5VWQ8 1189 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 TMEM179Q6ZVK1 233 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 MRPL43Q8N983 215 aaKnown RBP6.17□□□□□ -1.42
GYPB-212ENST00000511198 PRPF38AQ8NAV1 312 aaKnown RBP6.17□□□□□ -1.42
GYPB-212ENST00000511198 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
GYPB-212ENST00000511198 EDEM2Q9BV94 578 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 CHMP4AQ9BY43 222 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 PRDM13Q9H4Q3 707 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 RIOX1Q9H6W3 641 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 KCNE5Q9UJ90 142 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 PAXBP1Q9Y5B6 917 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 CACNA1EQ15878 2313 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 RAD50Q92878 1312 aa6.17□□□□□ -1.42
GYPB-212ENST00000511198 PCNX2A6NKB5 2137 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 PCSK5Q92824 1860 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 CAPN8A6NHC0 703 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 ANHXE9PGG2 379 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 ZFPL1O95159 310 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 EPN2O95208 641 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 GPANK1O95872 356 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 MT-CO1P00395 513 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 AKR1B1P15121 316 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
GYPB-212ENST00000511198 FDXRP22570 491 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 SLC6A4P31645 630 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 ICA1Q05084 483 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 SLFN5Q08AF3 891 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 MTMR1Q13613 665 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 PPP2R5BQ15173 497 aa6.16□□□□□ -1.42
GYPB-212ENST00000511198 MLF2Q15773 248 aaPredicted RBP6.16□□□□□ -1.42
GYPB-212ENST00000511198 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms