RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CLIC5Q9NZA1 410 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 HESX1Q9UBX0 185 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 RASAL2Q9UJF2 1139 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 LSM7Q9UK45 103 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 USP18Q9UMW8 372 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 TRIM33Q9UPN9 1127 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 PCDHB4Q9Y5E5 795 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 HELZP42694 1942 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 CEP250Q9BV73 2442 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 SMG1Q96Q15 3661 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 A0A0A0MRY4 1105 aa9□□□□□ -0.97
PDPN-209ENST00000510906 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9□□□□□ -0.97
PDPN-209ENST00000510906 NEDD8-MDP1E9PL57 170 aa9□□□□□ -0.97
PDPN-209ENST00000510906 RNF225M0QZC1 329 aaPredicted RBP9□□□□□ -0.97
PDPN-209ENST00000510906 SGK1O00141 431 aa9□□□□□ -0.97
PDPN-209ENST00000510906 PAGE1O75459 146 aa9□□□□□ -0.97
PDPN-209ENST00000510906 STC2O76061 302 aa9□□□□□ -0.97
PDPN-209ENST00000510906 KLF8O95600 359 aaPredicted RBP9□□□□□ -0.97
PDPN-209ENST00000510906 GNA14O95837 355 aa9□□□□□ -0.97
PDPN-209ENST00000510906 ZBED1O96006 694 aa9□□□□□ -0.97
PDPN-209ENST00000510906 AFPP02771 609 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 KLKB1P03952 638 aa9□□□□□ -0.97
PDPN-209ENST00000510906 RETP07949 1114 aa9□□□□□ -0.97
PDPN-209ENST00000510906 HMBSP08397 361 aa9□□□□□ -0.97
PDPN-209ENST00000510906 PAEPP09466 180 aa9□□□□□ -0.97
PDPN-209ENST00000510906 CCDC192P0DO97 292 aa9□□□□□ -0.97
PDPN-209ENST00000510906 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 GRIA2P42262 883 aa9□□□□□ -0.97
PDPN-209ENST00000510906 KIR2DL1P43626 348 aaPredicted RBP9□□□□□ -0.97
PDPN-209ENST00000510906 BCAT1P54687 386 aa9□□□□□ -0.97
PDPN-209ENST00000510906 SLC8A3P57103 927 aa9□□□□□ -0.97
PDPN-209ENST00000510906 YWHAGP61981 247 aaKnown RBP eCLIP9□□□□□ -0.97
PDPN-209ENST00000510906 MRPS21P82921 87 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 SRSF11Q05519 484 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 GOLGA8FQ08AF8 430 aa9□□□□□ -0.97
PDPN-209ENST00000510906 GOLGA8DPQ0D2H9 430 aa9□□□□□ -0.97
PDPN-209ENST00000510906 ADIGQ0VDE8 80 aa9□□□□□ -0.97
PDPN-209ENST00000510906 BST2Q10589 180 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 CETN1Q12798 172 aa9□□□□□ -0.97
PDPN-209ENST00000510906 EFEMP1Q12805 493 aa9□□□□□ -0.97
PDPN-209ENST00000510906 BTBD8Q5XKL5 378 aa9□□□□□ -0.97
PDPN-209ENST00000510906 PM20D1Q6GTS8 502 aa9□□□□□ -0.97
PDPN-209ENST00000510906 TPGS1Q6ZTW0 290 aa9□□□□□ -0.97
PDPN-209ENST00000510906 RRAGAQ7L523 313 aa9□□□□□ -0.97
PDPN-209ENST00000510906 BHLHA9Q7RTU4 235 aa9□□□□□ -0.97
PDPN-209ENST00000510906 TADA2BQ86TJ2 420 aa9□□□□□ -0.97
PDPN-209ENST00000510906 KBTBD6Q86V97 674 aa9□□□□□ -0.97
PDPN-209ENST00000510906 ZNF276Q8N554 614 aa9□□□□□ -0.97
PDPN-209ENST00000510906 IL17RCQ8NAC3 791 aa9□□□□□ -0.97
PDPN-209ENST00000510906 RBBP8NLQ8NC74 664 aaPredicted RBP9□□□□□ -0.97
PDPN-209ENST00000510906 TSTD1Q8NFU3 115 aa9□□□□□ -0.97
PDPN-209ENST00000510906 CCDC26Q8TAB7 109 aa9□□□□□ -0.97
PDPN-209ENST00000510906 P2RY11Q96G91 374 aa9□□□□□ -0.97
PDPN-209ENST00000510906 KREMEN1Q96MU8 473 aa9□□□□□ -0.97
PDPN-209ENST00000510906 BBS2Q9BXC9 721 aa9□□□□□ -0.97
PDPN-209ENST00000510906 TPSD1Q9BZJ3 242 aa9□□□□□ -0.97
PDPN-209ENST00000510906 INTS2Q9H0H0 1204 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 LRRC4Q9HBW1 653 aa9□□□□□ -0.97
PDPN-209ENST00000510906 DNAJC17Q9NVM6 304 aaKnown RBP9□□□□□ -0.97
PDPN-209ENST00000510906 DEC1Q9P2X7 70 aa9□□□□□ -0.97
PDPN-209ENST00000510906 RWDD2AQ9UIY3 292 aa9□□□□□ -0.97
PDPN-209ENST00000510906 MMP17Q9ULZ9 603 aa9□□□□□ -0.97
PDPN-209ENST00000510906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9□□□□□ -0.97
PDPN-209ENST00000510906 SLC12A8A0AV02 714 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 TBC1D3BA6NDS4 549 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 E7ENQ6 273 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 PIK3R2O00459 728 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 DCLK1O15075 740 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 CACNG3O60359 315 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 ADAM23O75077 832 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 SETSIPP0DME0 302 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 TYRP14679 529 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 CORO1AP31146 461 aaKnown RBP8.99□□□□□ -0.97
PDPN-209ENST00000510906 TNFRSF4P43489 277 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 RGS7P49802 495 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 DGKEP52429 567 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 ZNF132P52740 706 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 GCNT1Q02742 428 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 PCDH1Q08174 1060 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 ACAP1Q15027 740 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 CRY1Q16526 586 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 RSPO4Q2I0M5 234 aaPredicted RBP8.99□□□□□ -0.97
PDPN-209ENST00000510906 C10orf76Q5T2E6 689 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 ANO7Q6IWH7 933 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 PSAPL1Q6NUJ1 521 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 LCLAT1Q6UWP7 414 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 C20orf204Q6ZNR8 217 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 TOGARAM2Q6ZUX3 1019 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 RSRC2Q7L4I2 434 aaKnown RBP8.99□□□□□ -0.97
PDPN-209ENST00000510906 CACNA2D4Q7Z3S7 1137 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 SIX6OS1Q8N1H7 587 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 CACTIN-AS1Q8N1I8 211 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 ARHGAP18Q8N392 663 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 TERB1Q8NA31 727 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 TXNDC5Q8NBS9 432 aaKnown RBP8.99□□□□□ -0.97
PDPN-209ENST00000510906 MDGA1Q8NFP4 955 aa8.99□□□□□ -0.97
PDPN-209ENST00000510906 CNOT6LQ96LI5 555 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms