RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC2A13Q96QE2 648 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 IPPQ9Y573 584 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 RPS6KL1Q9Y6S9 549 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 MYO18AQ92614 2054 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 NVLO15381 856 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 BEST1O76090 585 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 GSRP00390 522 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 ACADSP16219 412 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 ACAT1P24752 427 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 TYK2P29597 1187 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 GP5P40197 560 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 AIF1P55008 147 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 BLMHQ13867 455 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 GRTP1Q5TC63 336 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 SYPL2Q5VXT5 272 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 ANKRD23Q86SG2 305 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 RBM15BQ8NDT2 890 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 CERS2Q96G23 380 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 SLC9A7Q96T83 725 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 CPNE1Q99829 537 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 FAM96AQ9H5X1 160 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 PIGVQ9NUD9 493 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 DNAJC16Q9Y2G8 782 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 PSAT1Q9Y617 370 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 KIF1CO43896 1103 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 CIB2O75838 187 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 SERPINE1P05121 402 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 FGF3P11487 239 aaPredicted RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 KCNA4P22459 653 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 GRK2P25098 689 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 TKTL1P51854 596 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 MXRA7P84157 204 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 THOC5Q13769 683 aaKnown RBP18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 CLEC20AQ6ZU45 233 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 FAM167BQ9BTA0 163 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 LRRC40Q9H9A6 602 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 ZNF408Q9H9D4 720 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 RAD54BQ9Y620 910 aa18.4■□□□□ 0.54
CCHCR1-228ENST00000509552 DCLK1O15075 740 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 FBXO21O94952 628 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 FAM163BP0C2L3 166 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 FAM200BP0CF97 657 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 ERVK-10P10266 1014 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 CDC25CP30307 473 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 MLH1P40692 756 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 MAP3K7CLP57077 242 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 TEDDM1Q5T9Z0 273 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 SNX30Q5VWJ9 437 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 SCUBE1Q8IWY4 988 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 STX18Q9P2W9 335 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 APOBEC2Q9Y235 224 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 UNCXA6NJT0 531 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 PRR5-ARHGAP8B1AHC4 643 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 F8W8V4 182 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 KCNK1O00180 336 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 NCAM2O15394 837 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 ITM2AO43736 263 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 LYPLA1O75608 230 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 MX2P20592 715 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 LRPAP1P30533 357 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 ADRA1BP35368 520 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 ARHGAP8P85298 464 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 PCLAFQ15004 111 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 WSCD1Q658N2 575 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 PAQR9Q6ZVX9 377 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 BFARQ9NZS9 450 aa18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-228ENST00000509552 TREHO43280 583 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 TM7SF2O76062 418 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 PROCP04070 461 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 ERCC2P18074 760 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 CRYBB1P53674 252 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 NET1Q7Z628 596 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 SMG8Q8ND04 991 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 PPFIBP2Q8ND30 876 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 OR52K1Q8NGK4 314 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 NTAN1Q96AB6 310 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 C1orf21Q9H246 121 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 KRT82Q9NSB4 513 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 NMRK1Q9NWW6 199 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 DONSONQ9NYP3 566 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 KLHL2O95198 593 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 AOC1P19801 751 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 SPRP35270 261 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 ABL2P42684 1182 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 PSEN2P49810 448 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 TPI1P60174 286 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 UBAP2LQ14157 1087 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 HIC1Q14526 733 aa18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 TRMT5Q32P41 509 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-228ENST00000509552 CCDC153Q494R4 210 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms