RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PITPNM3Q9BZ71 974 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 RASSF4Q9H2L5 321 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 RETREG1Q9H6L5 497 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 TMEM30AQ9NV96 361 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 TMLHEQ9NVH6 421 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 MOCS1Q9NZB8 636 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 COX16Q9P0S2 106 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 KLHL8Q9P2G9 620 aaPredicted RBP9.5□□□□□ -0.89
HTT-205ENST00000509043 CACNG4Q9UBN1 327 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 PCDHB7Q9Y5E2 793 aa9.5□□□□□ -0.89
HTT-205ENST00000509043 FAM92AA1XBS5 289 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 WASH4PA8MWX3 477 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 I3L4J1 428 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 DDHD2O94830 711 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 LRIG2O94898 1065 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 AP2A1O95782 977 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 C1QAP02745 245 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 POLBP06746 335 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 SRGAP2BP0DMP2 458 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TAC1P20366 129 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 CCNCP24863 283 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 YY1P25490 414 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 PTPN3P26045 913 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 EPHB2P29323 1055 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 ALDH3A1P30838 453 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 OR1G1P47890 313 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 NPY2RP49146 381 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 NRLP54845 237 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 CCDC15Q0P6D6 951 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 MBTPS1Q14703 1052 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 SLC39A12Q504Y0 691 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TEX44Q53QW1 395 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 PLEKHG4Q58EX7 1191 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 SPANXN3Q5MJ09 141 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 SPDYAQ5MJ70 313 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 FAXCQ5TGI0 409 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 FYB2Q5VWT5 728 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 RNF43Q68DV7 783 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TIGD7Q6NT04 549 aaPredicted RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 PID1Q7Z2X4 250 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 CCDC117Q8IWD4 279 aaPredicted RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 ZNF567Q8N184 647 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 NUP93Q8N1F7 819 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TAB3Q8N5C8 712 aaPredicted RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 SPPL2BQ8TCT7 592 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 LINC01599Q8WXQ3 324 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 CCT6BQ92526 530 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 EDEM1Q92611 657 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TBC1D31Q96DN5 1066 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 CFAP36Q96G28 342 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 SPATA17Q96L03 361 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 CDK5RAP1Q96SZ6 601 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 ELAC2Q9BQ52 826 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 OSBPL7Q9BZF2 842 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 GBA3Q9H227 469 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 LRRC40Q9H9A6 602 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 FGFR1OP2Q9NVK5 253 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 HAUS2Q9NVX0 235 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 CLIC5Q9NZA1 410 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 IL37Q9NZH6 218 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 BFARQ9NZS9 450 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 KLHL14Q9P2G3 628 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 ADAM28Q9UKQ2 775 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 TLR6Q9Y2C9 796 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 AAR2Q9Y312 384 aaKnown RBP9.49□□□□□ -0.89
HTT-205ENST00000509043 MAD1L1Q9Y6D9 718 aa9.49□□□□□ -0.89
HTT-205ENST00000509043 A0A1W2PPM1 405 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 COPEO14579 308 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ENPP3O14638 875 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 KLF11O14901 512 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 CACNG3O60359 315 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 LPXNO60711 386 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 AVILO75366 819 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ANXA9O76027 345 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ALDH2P05091 517 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ITGB1P05556 798 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 DHRS4L1P0CG22 281 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 FGFR3P22607 806 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 RPA3P35244 121 aaPredicted RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 CCNFP41002 786 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 APLP1P51693 650 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 NEK3P51956 506 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 KPNA1P52294 538 aaPredicted RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 CAP1Q01518 475 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ACTN3Q08043 901 aaPredicted RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 FAAP100Q0VG06 881 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ILF2Q12905 390 aaKnown RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 EFTUD2Q15029 972 aaKnown RBP eCLIP9.48□□□□□ -0.89
HTT-205ENST00000509043 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 FAM72AQ5TYM5 149 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 MANEALQ5VSG8 457 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 NAPEPLDQ6IQ20 393 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 FAM72DQ6L9T8 149 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 LVRNQ6Q4G3 990 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 SH2D5Q6ZV89 423 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms