RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 EEF1A2Q05639 463 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 INAVAQ3KP66 663 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 EFHC1Q5JVL4 640 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 EEF1A1P5Q5VTE0 462 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 C1orf146Q5VVC0 180 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 PRMT9Q6P2P2 845 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 XKRXQ6PP77 449 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 RIC3Q7Z5B4 369 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 DSG4Q86SJ6 1040 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 TEX19Q8NA77 164 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 RHPN1Q8TCX5 695 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 ACDQ96AP0 544 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 NELL2Q99435 816 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 TRAF4Q9BUZ4 470 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 BRINP2Q9C0B6 783 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 ARHGEF4Q9NR80 690 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 EBF1Q9UH73 591 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 STOML2Q9UJZ1 356 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 PRKAB1Q9Y478 270 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 ZMYM2Q9UBW7 1377 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 SLIT3O75094 1523 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 A0A087WXM4 84 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 FAM170AA1A519 330 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 FAM47DPA6NHR8 397 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 RFPL2O75678 378 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 ATE1O95260 518 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 PIGNO95427 931 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMA2P25787 234 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 STARP49675 285 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 LIMK1P53667 647 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TMBIM6P55061 237 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 GPLD1P80108 840 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 FAPQ12884 760 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 DLGAP5Q15398 846 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TRIP10Q15642 601 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 OASLQ15646 514 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 FAM76BQ5HYJ3 339 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 BRMS1LQ5PSV4 323 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 XKR5Q6UX68 686 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 MTDHQ86UE4 582 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 ZSWIM9Q86XI8 627 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 ARMC8Q8IUR7 673 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 RCOR2Q8IZ40 523 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 DENND1AQ8TEH3 1009 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 FNIP1Q8TF40 1166 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 CRAMP1Q96RY5 1269 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 DCLK3Q9C098 648 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 SLC6A15Q9H2J7 730 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 LRRC19Q9H756 370 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 PNPLA3Q9NST1 481 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 ACOXLQ9NUZ1 547 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 B3GNT2Q9NY97 397 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 MYRFQ9Y2G1 1151 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 TRPM2O94759 1503 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 NFAT5O94916 1531 aa11.06□□□□□ -0.64
PDLIM5-210ENST00000508216 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 F8W036 122 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMD9O00233 223 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PODXLO00592 558 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 FOXN1O15353 648 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TTLL1O95922 423 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PRKAR1AP10644 381 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PIK3R1P27986 724 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ARHGDIAP52565 204 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 JAM2P57087 298 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PTENP60484 403 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 EXOSC10Q01780 885 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PAK1Q13153 545 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MPP2Q14168 576 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TOR2AQ5JU69 321 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 LPCAT4Q643R3 524 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 ZDHHC24Q6UX98 284 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 MAMDC2Q7Z304 686 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 TMPRSS9Q7Z410 1059 aa11.05□□□□□ -0.64
PDLIM5-210ENST00000508216 BNIPLQ7Z465 357 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms