RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 AGO2Q9UKV8 859 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 SPENQ96T58 3664 aaKnown RBP7.37□□□□□ -1.23
VCAN-206ENST00000505615 CRYBG3Q68DQ2 2970 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 A0A1W2PPC4 97 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 FAM92AA1XBS5 289 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 CLDN5O00501 218 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 YKT6O15498 198 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 SYNCRIPO60506 623 aaKnown RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 SIN3BO75182 1162 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 PENKP01210 267 aaPredicted RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 PLA2G4BP0C869 781 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 CKMT2P17540 419 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 ABCB4P21439 1286 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 SCP2P22307 547 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 LSSP48449 732 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 C21orf59P57076 290 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 RACK1P63244 317 aaKnown RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 GTF2BQ00403 316 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 GRIN1Q05586 938 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 BNIP3Q12983 259 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 SERINC3Q13530 473 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 CAMK2GQ13555 558 aaPredicted RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 MAPRE1Q15691 268 aaKnown RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 TMEM119Q4V9L6 283 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 KRT79Q5XKE5 535 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 SYT9Q86SS6 491 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 NECAB1Q8N987 351 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 OR2T3Q8NH03 318 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 SORCS1Q8WY21 1168 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 PIWIL1Q96J94 861 aaKnown RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 REEP2Q9BRK0 252 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 ACE2Q9BYF1 805 aaPredicted RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 BTBD1Q9H0C5 482 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 POLR1BQ9H9Y6 1135 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 KCND2Q9NZV8 630 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 CHORDC1Q9UHD1 332 aaPredicted RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 ITGA11Q9UKX5 1188 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 ODF2LQ9ULJ1 636 aa7.36□□□□□ -1.23
VCAN-206ENST00000505615 ZFC3H1O60293 1989 aaKnown RBP7.36□□□□□ -1.23
VCAN-206ENST00000505615 LRRK1Q38SD2 2015 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 WNT9AO14904 365 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 LZTS3O60299 673 aaPredicted RBP7.35□□□□□ -1.23
VCAN-206ENST00000505615 TLR5O60602 858 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 RTN3O95197 1032 aaPredicted RBP7.35□□□□□ -1.23
VCAN-206ENST00000505615 TBX18O95935 607 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 EPHX1P07099 455 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CCR10P46092 362 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 RXRGP48443 463 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 SLC5A3P53794 718 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 BCAT1P54687 386 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CDH8P55286 799 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 RBP5P82980 135 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 TLE1Q04724 770 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 FYB2Q5VWT5 728 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 TMEM215Q68D42 235 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 KIAA0895LQ68EN5 471 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 DPH6Q7L8W6 267 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 LSMEM2Q8N112 164 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 NUP93Q8N1F7 819 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CSGALNACT2Q8N6G5 542 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 GTF3C6Q969F1 213 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 MMS19Q96T76 1030 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 PLIN2Q99541 437 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 MRPL45Q9BRJ2 306 aaKnown RBP7.35□□□□□ -1.23
VCAN-206ENST00000505615 B3GNT5Q9BYG0 378 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 RAB34Q9BZG1 259 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 MTMR12Q9C0I1 747 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 ELOVL4Q9GZR5 314 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 DPEP3Q9H4B8 488 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 THSD1Q9NS62 852 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 ELOVL2Q9NXB9 296 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CLEC4EQ9ULY5 219 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 MAN2B2Q9Y2E5 1009 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 CSMD1Q96PZ7 3565 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 ZFHX3Q15911 3703 aa7.35□□□□□ -1.23
VCAN-206ENST00000505615 SCO2A0A1W2PP80 73 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 ENO4A6NNW6 628 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TRIM38O00635 465 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 USP12O75317 370 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 KRT19P08727 400 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TXLNAP40222 546 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TOB1P50616 345 aaPredicted RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 NXPH1P58417 271 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 RPS14P62263 151 aaKnown RBP7.34□□□□□ -1.23
VCAN-206ENST00000505615 E2F1Q01094 437 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 TRIM29Q14134 588 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 KCNJ12Q14500 433 aa7.34□□□□□ -1.23
VCAN-206ENST00000505615 EIF4HQ15056 248 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms