RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 C2orf40Q9H1Z8 148 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DNAJA2O60884 412 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DGKIO75912 1065 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 IRF9Q00978 393 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 DEUP1Q05D60 604 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 ITGA7Q13683 1181 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 AMHR2Q16671 573 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 SOWAHAQ2M3V2 549 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
UBE3D-206ENST00000505226 TMEM110Q86TL2 294 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 PPP4R1Q8TF05 950 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 HTR3CQ8WXA8 447 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 PPP1R36Q96LQ0 422 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
UBE3D-206ENST00000505226 SCN1AP35498 2009 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 GOLGA8QA0A0J9YX86 632 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 GOLGA8OA6NCC3 632 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 GOLGA8NF8WBI6 632 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 G3V2L1 256 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PPEF2O14830 753 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 CPA3P15088 417 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 GRK2P25098 689 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 TYK2P29597 1187 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 SERPINB5P36952 375 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 FDFT1P37268 417 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PHKA2P46019 1235 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 LRRC8BQ6P9F7 803 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 COPS5Q92905 334 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PRICKLE1Q96MT3 831 aaPredicted RBP12.19□□□□□ -0.46
UBE3D-206ENST00000505226 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 WDR55Q9H6Y2 383 aaPredicted RBP12.19□□□□□ -0.46
UBE3D-206ENST00000505226 CAB39LQ9H9S4 337 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AS3MTQ9HBK9 375 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 SNX15Q9NRS6 342 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AP4E1Q9UPM8 1137 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AP1G1O43747 822 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 LTFP02788 710 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AMHP03971 560 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PYGLP06737 847 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 ATICP31939 592 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 XIAPP98170 497 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 DCLK2Q8N568 766 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 C7orf31Q8N865 590 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 DNAJC1Q96KC8 554 aaKnown RBP12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AGAP2Q99490 1192 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PDZD7Q9H5P4 517 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 HSFX1Q9UBD0 423 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 MORF4L1Q9UBU8 362 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PCDHB12Q9Y5F1 795 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 A0A0A0MRY4 1105 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 SOCS7O14512 581 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 PEX1O43933 1283 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 HSPA1LP34931 641 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 LILRA2Q8N149 483 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 SPATA13Q96N96 652 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 CDH19Q9H159 772 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 ARHGAP26Q9UNA1 814 aa12.19□□□□□ -0.46
UBE3D-206ENST00000505226 AIM2O14862 343 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 MFSD11O43934 449 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 CHRNGP07510 517 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 MYL4P12829 197 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 PGAM1P18669 254 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 GLDCP23378 1020 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 PSMB4P28070 264 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 PMLP29590 882 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 MS4A2Q01362 244 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 PDCD2Q16342 344 aaPredicted RBP12.18□□□□□ -0.46
UBE3D-206ENST00000505226 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 PQLC1Q8N2U9 271 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBE3D-206ENST00000505226 CENPIQ92674 756 aaPredicted RBP12.18□□□□□ -0.46
UBE3D-206ENST00000505226 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
UBE3D-206ENST00000505226 DPEP3Q9H4B8 488 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 RNF19AQ9NV58 838 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 SSX2IPQ9Y2D8 614 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 DTNAQ9Y4J8 743 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 USP12O75317 370 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 DPP6P42658 865 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 NR2C2P49116 596 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 NUMBP49757 651 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 THOP1P52888 689 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 NDRG1Q92597 394 aaKnown RBP12.18□□□□□ -0.46
UBE3D-206ENST00000505226 FAM167AQ96KS9 214 aa12.18□□□□□ -0.46
UBE3D-206ENST00000505226 BTBD9Q96Q07 612 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms