RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNF276Q8N554 614 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FAM181AQ8N9Y4 354 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 LINC00301Q8NCQ3 95 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 KIAA0895Q8NCT3 520 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 OR14C36Q8NHC7 312 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FOXD4L4Q8WXT5 416 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 TSC1Q92574 1164 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CYP3A43Q9HB55 503 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 MTMR6Q9Y217 621 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FRMD4BQ9Y2L6 1034 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 HBS1LQ9Y450 684 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CEP83Q9Y592 693 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 PCDHB1Q9Y5F3 818 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 LOC400499M0QZD8 3231 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CELSR3Q9NYQ7 3312 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 MYLKQ15746 1914 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 PVALEFA0A1B0GWK0 134 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 TTC34A8MYJ7 566 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ERVH48-1M5A8F1 160 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 TLR4O00206 839 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 FFAR2O15552 330 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 KLK10O43240 276 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CUTAO60888 179 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CKMT2P17540 419 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 MAT2AP31153 395 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC6A4P31645 630 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC8A1P32418 973 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CSKP41240 450 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ADPRHP54922 357 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PCBP4P57723 403 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 TMPRSS3P57727 454 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ZNF445P59923 1031 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PPP2CBP62714 309 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PPP2CAP67775 309 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 GABREP78334 506 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 INSM1Q01101 510 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PPP3CAQ08209 521 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PDE4CQ08493 712 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 STK4Q13043 487 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CUL4AQ13619 759 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CDH18Q13634 790 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 POM121L1PQ3SYA9 428 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 KMT5BQ4FZB7 885 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 C1orf220Q5T0J3 134 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ADGRF1Q5T601 910 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 BROXQ5VW32 411 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 BSPRYQ5W0U4 402 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CEP57L1Q8IYX8 460 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 SIX6OS1Q8N1H7 587 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ZNF248Q8NDW4 579 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 OR2T34Q8NGX1 318 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 TATDN2Q93075 761 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 PRICKLE1Q96MT3 831 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ZNF396Q96N95 335 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 MYOCQ99972 504 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 SEMA4CQ9C0C4 833 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 KCTD10Q9H3F6 313 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 MAGEF1Q9HAY2 307 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 OLA1Q9NTK5 396 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 DMAC2Q9NW81 257 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 ADAMTS1Q9UHI8 967 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 SCML1Q9UN30 329 aa7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 MORC2Q9Y6X9 1032 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 FLNBO75369 2602 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-203ENST00000504841 NBEAQ8NFP9 2946 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3DA0A087WVF3 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3IA0A087WXS9 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3EA0A087X179 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3KA0A087X1G2 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TYW5A2RUC4 315 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3FA6NER0 549 aaPredicted RBP7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 CAPN8A6NHC0 703 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 YJEFN3A6XGL0 299 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3LB9A6J9 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 E7ENQ6 273 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 PIK3R2O00459 728 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TRIM38O00635 465 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 IKBKBO14920 756 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 CALUO43852 315 aaPredicted RBP7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC28A2O43868 658 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 PPP6R2O75170 966 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 MT-CO3P00414 261 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 IL1BP01584 269 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 ASLP04424 464 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D3HP0C7X1 549 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 KRT13P13646 458 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 PDIA4P13667 645 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 LCP1P13796 627 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 CD19P15391 556 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 NR2F2P24468 414 aa7.15□□□□□ -1.26
NPIPB3-203ENST00000504841 CTSOP43234 321 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms