RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 NPWQ8N729 165 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 ATP6V0D2Q8N8Y2 350 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 MCUQ8NE86 351 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 PDZD8Q8NEN9 1154 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 AUTS2Q8WXX7 1259 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 SPATA13Q96N96 652 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
CDK7-203ENST00000504147 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 ZBED2Q9BTP6 218 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 FRMD8Q9BZ67 464 aaPredicted RBP10.54□□□□□ -0.72
CDK7-203ENST00000504147 CATSPERBQ9H7T0 1116 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 CCSER2Q9H7U1 834 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 MRPL17Q9NRX2 175 aaKnown RBP10.54□□□□□ -0.72
CDK7-203ENST00000504147 SEPT10Q9P0V9 454 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 FNIP2Q9P278 1114 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 MAFFQ9ULX9 164 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
CDK7-203ENST00000504147 NLRC5Q86WI3 1866 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 A0A087WUV0 522 aaPredicted RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 E9PAM4 449 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 RASGRF2O14827 1237 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 MTSS1O43312 755 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 OPHN1O60890 802 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TCEA3O75764 348 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 FGF18O76093 207 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 HMBSP08397 361 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 CSH1P0DML2 217 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 CSH2P0DML3 217 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TSHRP16473 764 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 HMGA1P17096 107 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 TPSB2P20231 275 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 DNAJB2P25686 324 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 CREMQ03060 361 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 PPIDQ08752 370 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 SEMA5AQ13591 1074 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 STAT4Q14765 748 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 FASTKD3Q14CZ7 662 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 TERF2Q15554 542 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TPSAB1Q15661 275 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TAF12Q16514 161 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 PARP6Q2NL67 630 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 PIK3R6Q5UE93 754 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 SNX30Q5VWJ9 437 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 ANKMY2Q8IV38 441 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 TCEAL8Q8IYN2 117 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 LZTR1Q8N653 840 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 PYROXD1Q8WU10 500 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 EXOC4Q96A65 974 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 PGM2Q96G03 612 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 CELF6Q96J87 481 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 BTN2A3PQ96KV6 586 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 MYRFLQ96LU7 910 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 ZNF512Q96ME7 567 aaPredicted RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDK7-203ENST00000504147 TRPM5Q9NZQ8 1165 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 CXXC1Q9P0U4 656 aaPredicted RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 DNMT3LQ9UJW3 386 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 NEU3Q9UQ49 428 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 SSX2IPQ9Y2D8 614 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 YIPF1Q9Y548 306 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
CDK7-203ENST00000504147 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.53□□□□□ -0.72
CDK7-203ENST00000504147 SMIM23A6NLE4 172 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 WASH4PA8MWX3 477 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 E7EVH7 732 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 PRRG1O14668 218 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 TEX28O15482 410 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 RGS16O15492 202 aaPredicted RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 TLR5O60602 858 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 BANF1O75531 89 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 CXCL14O95715 111 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 IGLV3-27P01718 113 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 IVLP07476 585 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 APRTP07741 180 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 LINC00271P0C7V0 271 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 PTPN3P26045 913 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 ATP5C1P36542 298 aaKnown RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 GARSP41250 739 aaKnown RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 SLCO1A2P46721 670 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 LMAN1P49257 510 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 EPHB3P54753 998 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 RING1Q06587 406 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 TWF1Q12792 350 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 MTA1Q13330 715 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 AUHQ13825 339 aaKnown RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 VEPH1Q14D04 833 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 DNAJC21Q5F1R6 531 aaKnown RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 MS4A13Q5J8X5 152 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 HECTD3Q5T447 861 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 SYCP2LQ5T4T6 812 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 ACBD5Q5T8D3 534 aaPredicted RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 EMC10Q5UCC4 262 aa10.52□□□□□ -0.73
CDK7-203ENST00000504147 PSRC1Q6PGN9 363 aaPredicted RBP10.52□□□□□ -0.73
CDK7-203ENST00000504147 LRRC31Q6UY01 552 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms