RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 FBRSQ9HAH7 460 aa22.83■■□□□ 1.25
LSM6-203ENST00000503982 XPO7Q9UIA9 1087 aaKnown RBP22.83■■□□□ 1.25
LSM6-203ENST00000503982 PCDH15Q96QU1 1955 aa22.83■■□□□ 1.24
LSM6-203ENST00000503982 A0A1B0GTW7 788 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 LUC7L3O95232 432 aaKnown RBP22.82■■□□□ 1.24
LSM6-203ENST00000503982 PNMA6AP0CW24 399 aaPredicted RBP22.82■■□□□ 1.24
LSM6-203ENST00000503982 ABCB4P21439 1286 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 TAF5Q15542 800 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 PTPRNQ16849 979 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 MMS22LQ6ZRQ5 1243 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 CADM4Q8NFZ8 388 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 MYEOVQ96EZ4 313 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 CPXM1Q96SM3 734 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 PRSS16Q9NQE7 514 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.82■■□□□ 1.24
LSM6-203ENST00000503982 DDIT4Q9NX09 232 aa22.82■■□□□ 1.24
LSM6-203ENST00000503982 KIAA1522Q9P206 1035 aaPredicted RBP22.82■■□□□ 1.24
LSM6-203ENST00000503982 AJAP1Q9UKB5 411 aaPredicted RBP22.82■■□□□ 1.24
LSM6-203ENST00000503982 TPRP12270 2363 aaKnown RBP22.82■■□□□ 1.24
LSM6-203ENST00000503982 NUMA1Q14980 2115 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 RNASEH1O60930 286 aaKnown RBP22.81■■□□□ 1.24
LSM6-203ENST00000503982 HSF2BPO75031 334 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 ASLP04424 464 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 PITX1P78337 314 aaPredicted RBP22.81■■□□□ 1.24
LSM6-203ENST00000503982 PITRM1Q5JRX3 1037 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 ZNF776Q68DI1 518 aaPredicted RBP22.81■■□□□ 1.24
LSM6-203ENST00000503982 C11orf57Q6ZUT1 292 aaPredicted RBP22.81■■□□□ 1.24
LSM6-203ENST00000503982 FAM183BPQ6ZVS7 135 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 MTG2Q9H4K7 406 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 SIX2Q9NPC8 291 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 PLCB1Q9NQ66 1216 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 EIF2B4Q9UI10 523 aaKnown RBP22.81■■□□□ 1.24
LSM6-203ENST00000503982 PCDHGC3Q9UN70 934 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 NCKAP1Q9Y2A7 1128 aa22.81■■□□□ 1.24
LSM6-203ENST00000503982 METTL12A8MUP2 240 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 FOXN3O00409 490 aaPredicted RBP22.8■■□□□ 1.24
LSM6-203ENST00000503982 SLC2A3P11169 496 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 ERCC5P28715 1186 aaPredicted RBP22.8■■□□□ 1.24
LSM6-203ENST00000503982 NUMBP49757 651 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 BPIFB4P59827 614 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 RPS14P62263 151 aaKnown RBP22.8■■□□□ 1.24
LSM6-203ENST00000503982 NME3Q13232 169 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 KCNJ12Q14500 433 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 ST3GAL2Q16842 350 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 FSCBQ5H9T9 825 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 RABGAP1LQ5R372 815 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 SLC47A2Q86VL8 602 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 DHX40Q8IX18 779 aaKnown RBP22.8■■□□□ 1.24
LSM6-203ENST00000503982 BTBD1Q9H0C5 482 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 TMEM63CQ9P1W3 806 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 ERVW-1Q9UQF0 538 aa22.8■■□□□ 1.24
LSM6-203ENST00000503982 NYNRINQ9P2P1 1898 aaKnown RBP22.79■■□□□ 1.24
LSM6-203ENST00000503982 FAM170AA1A519 330 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 KCNU1A8MYU2 1149 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 BCAT2O15382 392 aaPredicted RBP22.79■■□□□ 1.24
LSM6-203ENST00000503982 GLI1P08151 1106 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 CCR1P32246 355 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 GRIK2Q13002 908 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 SKOR2Q2VWA4 1001 aaPredicted RBP22.79■■□□□ 1.24
LSM6-203ENST00000503982 WDTC1Q8N5D0 677 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 TTC17Q96AE7 1141 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 ASNSD1Q9NWL6 643 aa22.79■■□□□ 1.24
LSM6-203ENST00000503982 INTS6Q9UL03 887 aaKnown RBP22.79■■□□□ 1.24
LSM6-203ENST00000503982 SPAARA0A1B0GVQ0 90 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 ACACBO00763 2458 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 FSBPO95073 299 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 SEMA4FO95754 770 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 IGLV3-19P01714 112 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 ACSL1P33121 698 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 CLCN1P35523 988 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 NNMTP40261 264 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 RNASE9P60153 205 aaKnown RBP22.78■■□□□ 1.24
LSM6-203ENST00000503982 ZBTB16Q05516 673 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 SEMA3BQ13214 749 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 LRSAM1Q6UWE0 723 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 CIR1Q86X95 450 aaPredicted RBP22.78■■□□□ 1.24
LSM6-203ENST00000503982 DNASE2BQ8WZ79 361 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 SLC2A13Q96QE2 648 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 C6orf106Q9H6K1 298 aaPredicted RBP22.78■■□□□ 1.24
LSM6-203ENST00000503982 PCDHB9Q9Y5E1 797 aa22.78■■□□□ 1.24
LSM6-203ENST00000503982 FAM47DPA6NHR8 397 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 SIN3BO75182 1162 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 IGLV3-25P01717 112 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 ERBB2P04626 1255 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 TPM2P07951 284 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 SRPRAP08240 638 aaKnown RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 PDGFRAP16234 1089 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 RDXP35241 583 aaKnown RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 CTSOP43234 321 aaPredicted RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 SIM1P81133 766 aaPredicted RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 ECT2LQ008S8 904 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 SLC6A3Q01959 620 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 SFSWAPQ12872 951 aaKnown RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 DRAP1Q14919 205 aaPredicted RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 TAF3Q5VWG9 929 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 TMEM35BQ8NCS4 154 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 RPL10LQ96L21 214 aaKnown RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 RPRD1AQ96P16 312 aaPredicted RBP22.77■■□□□ 1.24
LSM6-203ENST00000503982 ZDHHC5Q9C0B5 715 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 SAMSN1Q9NSI8 373 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms