RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PRSS16Q9NQE7 514 aa11.14□□□□□ -0.63
SNCA-207ENST00000502987 STOML2Q9UJZ1 356 aa11.14□□□□□ -0.63
SNCA-207ENST00000502987 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
SNCA-207ENST00000502987 NFE2L3Q9Y4A8 694 aa11.14□□□□□ -0.63
SNCA-207ENST00000502987 A0A1B0GVT2 93 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 TMEM8BA6NDV4 472 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 PMM2O15305 246 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 SART1O43290 800 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 MED7O43513 233 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 RNASEH1O60930 286 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 MOCS3O95396 460 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 FGFR1OPO95684 399 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 SEMA4FO95754 770 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 SLC6A4P31645 630 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 ACSL1P33121 698 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 USP8P40818 1118 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 ACADSBP45954 432 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 CSNK1EP49674 416 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 AFF3P51826 1226 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 RPS14P62263 151 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 RING1Q06587 406 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 CDH18Q13634 790 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 TEAD4Q15561 434 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 HLA-BQ31612 363 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 TTC31Q49AM3 519 aaPredicted RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 RNF219Q5W0B1 726 aaPredicted RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 TTI2Q6NXR4 508 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 IL27RAQ6UWB1 636 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 CFAP52Q8N1V2 620 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 WFDC5Q8TCV5 224 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 RHBDD1Q8TEB9 315 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 GATA6Q92908 595 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 INTS2Q9H0H0 1204 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 FBRSQ9HAH7 460 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 IL21RQ9HBE5 538 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 TM7SF3Q9NS93 570 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 RALYQ9UKM9 306 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 APOBEC2Q9Y235 224 aaKnown RBP11.13□□□□□ -0.63
SNCA-207ENST00000502987 MSRB2Q9Y3D2 182 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 DMXL2Q8TDJ6 3036 aa11.13□□□□□ -0.63
SNCA-207ENST00000502987 TMEM131Q92545 1883 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 ASPMQ8IZT6 3477 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 THAP12O43422 761 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 GJB3O75712 270 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 IGLV3-19P01714 112 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 APOEP02649 317 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 FTH1P19P0C7X4 201 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 CSKP41240 450 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 RPS24P62847 133 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 GCNT1Q02742 428 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 SFSWAPQ12872 951 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 PAK1Q13153 545 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 SUZ12Q15022 739 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 PTPRNQ16849 979 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 ARHGAP44Q17R89 818 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 FAM133BQ5BKY9 247 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 ZNF776Q68DI1 518 aaPredicted RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 LRSAM1Q6UWE0 723 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 KIAA0907Q7Z7F0 614 aaPredicted RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 TRIM59Q8IWR1 403 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNCA-207ENST00000502987 FIBINQ8TAL6 211 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 DQX1Q8TE96 717 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 RNF34Q969K3 372 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 AZIN2Q96A70 460 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 NUCKS1Q9H1E3 243 aaKnown RBP11.12□□□□□ -0.63
SNCA-207ENST00000502987 PCED1AQ9H1Q7 454 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 MTG2Q9H4K7 406 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 TJP2Q9UDY2 1190 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 WDFY3Q8IZQ1 3526 aa11.12□□□□□ -0.63
SNCA-207ENST00000502987 IGF2RP11717 2491 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 SYNJ2BP-COX16A0A087WUM0 186 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 SMAPO00193 183 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 KCNK3O14649 394 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 IGLV3-27P01718 113 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 ASLP04424 464 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 GNA15P30679 374 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 GPD2P43304 727 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 ZBTB16Q05516 673 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 MORC3Q14149 939 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 CCDC157Q569K6 752 aa11.11□□□□□ -0.63
SNCA-207ENST00000502987 ZC3H12AQ5D1E8 599 aaKnown RBP11.11□□□□□ -0.63
SNCA-207ENST00000502987 MS4A13Q5J8X5 152 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms