RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ANKS1BQ7Z6G8 1248 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 SLFN11Q7Z7L1 901 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 CCAR2Q8N163 923 aaKnown RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 ZNF564Q8TBZ8 553 aaPredicted RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 KCNV2Q8TDN2 545 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 EIF3CQ99613 913 aaKnown RBP25.92■■□□□ 1.74
LSM6-202ENST00000502781 NCAPGQ9BPX3 1015 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 OR12D3Q9UGF7 316 aa25.92■■□□□ 1.74
LSM6-202ENST00000502781 CACNA1IQ9P0X4 2223 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 GOLGA6L6A8MZA4 724 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 E9PAM4 449 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 RNF8O76064 485 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 NDUFA10O95299 355 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 PCK1P35558 622 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 MRPS21P82921 87 aaKnown RBP25.91■■□□□ 1.74
LSM6-202ENST00000502781 TCEAL1Q15170 157 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 CYP4V2Q6ZWL3 525 aaPredicted RBP25.91■■□□□ 1.74
LSM6-202ENST00000502781 CHST9Q7L1S5 443 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 C1orf210Q8IVY1 113 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 BAG1Q99933 345 aaPredicted RBP25.91■■□□□ 1.74
LSM6-202ENST00000502781 MAGEB5Q9BZ81 275 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 ABCB8Q9NUT2 735 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 CTTNBP2NLQ9P2B4 639 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 IP6K2Q9UHH9 426 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 GGA2Q9UJY4 613 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 FZD10Q9ULW2 581 aa25.91■■□□□ 1.74
LSM6-202ENST00000502781 CACNA1HO95180 2353 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 GALR2O43603 387 aaPredicted RBP25.9■■□□□ 1.74
LSM6-202ENST00000502781 GSDMDP57764 484 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 EIF4HQ15056 248 aaKnown RBP25.9■■□□□ 1.74
LSM6-202ENST00000502781 FSCBQ5H9T9 825 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 EMC10Q5UCC4 262 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 TMEM215Q68D42 235 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 LRRC31Q6UY01 552 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 RAD9BQ6WBX8 426 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 CIR1Q86X95 450 aaPredicted RBP25.9■■□□□ 1.74
LSM6-202ENST00000502781 WFIKKN2Q8TEU8 576 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 BTBD6Q96KE9 485 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 PEBP4Q96S96 227 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 PPARGC1AQ9UBK2 798 aaKnown RBP25.9■■□□□ 1.74
LSM6-202ENST00000502781 NEU3Q9UQ49 428 aa25.9■■□□□ 1.74
LSM6-202ENST00000502781 FAM72CH0Y354 149 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 MYO1FO00160 1098 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 ATG13O75143 517 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 CLDN11O75508 207 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 MTA2O94776 668 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 PAPSS2O95340 614 aaPredicted RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 PABPC1P11940 636 aaKnown RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 MIPP30301 263 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 CD70P32970 193 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 MAGEA1P43355 309 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 CDH4P55283 916 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 LMAN2Q12907 356 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 SEMA3BQ13214 749 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 CDH18Q13634 790 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 HSF5Q4G112 596 aaPredicted RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 ALFQ53S48 1182 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 FAM72AQ5TYM5 149 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 FAM72DQ6L9T8 149 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 ADIPOR2Q86V24 386 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 FAM72BQ86X60 149 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 RHOT2Q8IXI1 618 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 MAML2Q8IZL2 1156 aaPredicted RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 CARNMT1Q8N4J0 409 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 IL17RCQ8NAC3 791 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 RPLP0P6Q8NHW5 317 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 SLC35G2Q8TBE7 412 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 RFFLQ8WZ73 363 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 OSGEPQ9NPF4 335 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 PRMT8Q9NR22 394 aaPredicted RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 SPATA6Q9NWH7 488 aaPredicted RBP25.89■■□□□ 1.74
LSM6-202ENST00000502781 C2orf42Q9NWW7 574 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 ZNF212Q9UDV6 495 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 TBC1D30Q9Y2I9 924 aa25.89■■□□□ 1.74
LSM6-202ENST00000502781 CNTN5O94779 1100 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 HNRNPLP14866 589 aaKnown RBP eCLIP25.88■■□□□ 1.73
LSM6-202ENST00000502781 L1CAMP32004 1257 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 SEC13P55735 322 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 SPA17Q15506 151 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 C2orf27AQ580R0 203 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 EFHC2Q5JST6 749 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 CXorf57Q6NSI4 855 aaKnown RBP25.88■■□□□ 1.73
LSM6-202ENST00000502781 PRRX2Q99811 253 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 KCNH6Q9H252 994 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 ELOVL2Q9NXB9 296 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 LCMT1Q9UIC8 334 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 PCDHA13Q9Y5I0 950 aa25.88■■□□□ 1.73
LSM6-202ENST00000502781 H0Y626 953 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 TIMM44O43615 452 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 LRIG2O94898 1065 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 CCR3P51677 355 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 PSTKQ8IV42 348 aaKnown RBP25.87■■□□□ 1.73
LSM6-202ENST00000502781 CCDC117Q8IWD4 279 aaPredicted RBP25.87■■□□□ 1.73
LSM6-202ENST00000502781 AHI1Q8N157 1196 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 PYROXD2Q8N2H3 581 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 ACDQ96AP0 544 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 MPP6Q9NZW5 540 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 KIAA1522Q9P206 1035 aaPredicted RBP25.87■■□□□ 1.73
LSM6-202ENST00000502781 INTS6Q9UL03 887 aaKnown RBP25.87■■□□□ 1.73
LSM6-202ENST00000502781 USP18Q9UMW8 372 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms