RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 RARBP10826 455 aa17■□□□□ 0.31
VCAN-204ENST00000502527 HOXC8P31273 242 aa17■□□□□ 0.31
VCAN-204ENST00000502527 TPI1P60174 286 aa17■□□□□ 0.31
VCAN-204ENST00000502527 PDE1CQ14123 709 aaPredicted RBP17■□□□□ 0.31
VCAN-204ENST00000502527 ARL13BQ3SXY8 428 aa17■□□□□ 0.31
VCAN-204ENST00000502527 HSF5Q4G112 596 aaPredicted RBP17■□□□□ 0.31
VCAN-204ENST00000502527 N4BP2L1Q5TBK1 243 aaPredicted RBP17■□□□□ 0.31
VCAN-204ENST00000502527 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
VCAN-204ENST00000502527 RINLQ6ZS11 566 aa17■□□□□ 0.31
VCAN-204ENST00000502527 FAM35AQ86V20 835 aa17■□□□□ 0.31
VCAN-204ENST00000502527 RNF169Q8NCN4 708 aa17■□□□□ 0.31
VCAN-204ENST00000502527 BRD8Q9H0E9 1235 aa17■□□□□ 0.31
VCAN-204ENST00000502527 DCLRE1BQ9H816 532 aa17■□□□□ 0.31
VCAN-204ENST00000502527 ZNF395Q9H8N7 513 aaPredicted RBP17■□□□□ 0.31
VCAN-204ENST00000502527 WDR6Q9NNW5 1121 aaKnown RBP17■□□□□ 0.31
VCAN-204ENST00000502527 RRN3Q9NYV6 651 aa17■□□□□ 0.31
VCAN-204ENST00000502527 TAS2R1Q9NYW7 299 aa17■□□□□ 0.31
VCAN-204ENST00000502527 SLC17A6Q9P2U8 582 aa17■□□□□ 0.31
VCAN-204ENST00000502527 PPARGC1AQ9UBK2 798 aaKnown RBP17■□□□□ 0.31
VCAN-204ENST00000502527 YJEFN3A6XGL0 299 aa17■□□□□ 0.31
VCAN-204ENST00000502527 CAPN14A8MX76 684 aa17■□□□□ 0.31
VCAN-204ENST00000502527 FAM72CH0Y354 149 aa17■□□□□ 0.31
VCAN-204ENST00000502527 KCNK1O00180 336 aa17■□□□□ 0.31
VCAN-204ENST00000502527 ENTPD5O75356 428 aa17■□□□□ 0.31
VCAN-204ENST00000502527 PTPN3P26045 913 aa17■□□□□ 0.31
VCAN-204ENST00000502527 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
VCAN-204ENST00000502527 CLNS1AP54105 237 aaKnown RBP17■□□□□ 0.31
VCAN-204ENST00000502527 IRX4P78413 519 aa17■□□□□ 0.31
VCAN-204ENST00000502527 SEMA3BQ13214 749 aa17■□□□□ 0.31
VCAN-204ENST00000502527 INSCQ1MX18 579 aa17■□□□□ 0.31
VCAN-204ENST00000502527 INTS6LQ5JSJ4 861 aaKnown RBP17■□□□□ 0.31
VCAN-204ENST00000502527 FAM72AQ5TYM5 149 aa17■□□□□ 0.31
VCAN-204ENST00000502527 FAM72DQ6L9T8 149 aa17■□□□□ 0.31
VCAN-204ENST00000502527 FAM72BQ86X60 149 aa17■□□□□ 0.31
VCAN-204ENST00000502527 ARHGAP24Q8N264 748 aa17■□□□□ 0.31
VCAN-204ENST00000502527 GPATCH11Q8N954 259 aa17■□□□□ 0.31
VCAN-204ENST00000502527 CFAP61Q8NHU2 1237 aa17■□□□□ 0.31
VCAN-204ENST00000502527 TTC8Q8TAM2 541 aa17■□□□□ 0.31
VCAN-204ENST00000502527 PGAP3Q96FM1 320 aaPredicted RBP17■□□□□ 0.31
VCAN-204ENST00000502527 SMOQ99835 787 aa17■□□□□ 0.31
VCAN-204ENST00000502527 CXorf56Q9H5V9 222 aa17■□□□□ 0.31
VCAN-204ENST00000502527 LRRC40Q9H9A6 602 aa17■□□□□ 0.31
VCAN-204ENST00000502527 ARMCX1Q9P291 453 aa17■□□□□ 0.31
VCAN-204ENST00000502527 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
VCAN-204ENST00000502527 M0QZ92 97 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 MTSS1O43312 755 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 AP2A1O95782 977 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 TOP3BO95985 862 aaKnown RBP16.99■□□□□ 0.31
VCAN-204ENST00000502527 GSRP00390 522 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 F9P00740 461 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 KITP10721 976 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 GP5P40197 560 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 TBCCQ15814 346 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 FSCN1Q16658 493 aaKnown RBP16.99■□□□□ 0.31
VCAN-204ENST00000502527 RAB41Q5JT25 222 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 GRTP1Q5TC63 336 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 TP53INP2Q8IXH6 220 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 TEX9Q8N6V9 391 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 ADAM32Q8TC27 787 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 CERS2Q96G23 380 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 ZNF570Q96NI8 536 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 CPNE1Q99829 537 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 C20orf27Q9GZN8 174 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 GEMIN8Q9NWZ8 242 aaKnown RBP16.99■□□□□ 0.31
VCAN-204ENST00000502527 MARCOQ9UEW3 520 aaPredicted RBP16.99■□□□□ 0.31
VCAN-204ENST00000502527 EMCNQ9ULC0 261 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 PSAT1Q9Y617 370 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 PTCH2Q9Y6C5 1203 aa16.99■□□□□ 0.31
VCAN-204ENST00000502527 PLIN3O60664 434 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 THP07101 528 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 NCAM1P13591 858 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 MX2P20592 715 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 IGFBP6P24592 240 aaPredicted RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 ZNF135P52742 658 aaPredicted RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 PPIDQ08752 370 aaKnown RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 MBLAC2Q68D91 279 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 C16orf46Q6P387 395 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 RFWD3Q6PCD5 774 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 DSTYKQ6XUX3 929 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 ZCCHC23Q6ZST2 131 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 WDR75Q8IWA0 830 aaKnown RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 KCNV2Q8TDN2 545 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 PCED1BQ96HM7 432 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 DDIT4Q9NX09 232 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 BFARQ9NZS9 450 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 CDH9Q9ULB4 789 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 MYBPHLA2RUH7 354 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 ERI2A8K979 691 aaKnown RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 LTFP02788 710 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 USP17L7P0C7H9 530 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 ERVK-10P10266 1014 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 MLH1P40692 756 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 PURAQ00577 322 aaKnown RBP16.98■□□□□ 0.31
VCAN-204ENST00000502527 CCL14Q16627 93 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 GSTCDQ8NEC7 633 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 OR52K1Q8NGK4 314 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.31
VCAN-204ENST00000502527 RILPQ96NA2 401 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms