RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SIX6OS1Q8N1H7 587 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 KCTD13Q8WZ19 329 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 MRGPRX3Q96LB0 322 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
MUC1-220ENST00000498431 NEUROG2Q9H2A3 272 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 NCKAP1Q9Y2A7 1128 aa16.69■□□□□ 0.26
MUC1-220ENST00000498431 FLNBO75369 2602 aaKnown RBP16.69■□□□□ 0.26
MUC1-220ENST00000498431 NYNRINQ9P2P1 1898 aaKnown RBP16.69■□□□□ 0.26
MUC1-220ENST00000498431 C10orf142B7Z368 130 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 O00370 1275 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 TLX3O43711 291 aaPredicted RBP16.68■□□□□ 0.26
MUC1-220ENST00000498431 DFNA5O60443 496 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 CSKP41240 450 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 CTSOP43234 321 aaPredicted RBP16.68■□□□□ 0.26
MUC1-220ENST00000498431 SYKP43405 635 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 RGS7P49802 495 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 RPS24P62847 133 aaKnown RBP16.68■□□□□ 0.26
MUC1-220ENST00000498431 CUL2Q13617 745 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 CST6Q15828 149 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 MPP7Q5T2T1 576 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 MMS22LQ6ZRQ5 1243 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 UBR7Q8N806 425 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 SAP25Q8TEE9 199 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 TFAP2BQ92481 460 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 CNDP2Q96KP4 475 aaKnown RBP16.68■□□□□ 0.26
MUC1-220ENST00000498431 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 MYLKQ15746 1914 aa16.68■□□□□ 0.26
MUC1-220ENST00000498431 A0A1W2PR77 199 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 E9PAM4 449 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 ACSL4O60488 711 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 RNASEH2AO75792 299 aaKnown RBP16.67■□□□□ 0.26
MUC1-220ENST00000498431 C1QL1O75973 258 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 LDOC1O95751 146 aaPredicted RBP16.67■□□□□ 0.26
MUC1-220ENST00000498431 JUPP14923 745 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 SEMG2Q02383 582 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 EDRF1Q3B7T1 1238 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 FSCBQ5H9T9 825 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 C9orf64Q5T6V5 341 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 PMF1Q6P1K2 205 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 MMAAQ8IVH4 418 aaKnown RBP16.67■□□□□ 0.26
MUC1-220ENST00000498431 SCML4Q8N228 414 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 EID2Q8N6I1 236 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 FIBINQ8TAL6 211 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 CCDC47Q96A33 483 aaKnown RBP16.67■□□□□ 0.26
MUC1-220ENST00000498431 NXPE2Q96DL1 559 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 ZSWIM1Q9BR11 485 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 AASDHPPTQ9NRN7 309 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 SCML1Q9UN30 329 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 COQ4Q9Y3A0 265 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 PCDHGA1Q9Y5H4 931 aa16.67■□□□□ 0.26
MUC1-220ENST00000498431 TENM4Q6N022 2769 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 IRAK2O43187 625 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 RFPL3O75679 317 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 CALCAP01258 141 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 ITGAVP06756 1048 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 SETSIPP0DME0 302 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
MUC1-220ENST00000498431 VDRP11473 427 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 ABCB4P21439 1286 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 CD38P28907 300 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 SLC11A2P49281 568 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 ACADVLP49748 655 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 TBX4P57082 545 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 ST8SIA6P61647 398 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 TARDBPQ13148 414 aaKnown RBP eCLIP16.66■□□□□ 0.26
MUC1-220ENST00000498431 DCAF17Q5H9S7 520 aaPredicted RBP16.66■□□□□ 0.26
MUC1-220ENST00000498431 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 UNC45BQ8IWX7 931 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 CARNMT1Q8N4J0 409 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 AADATQ8N5Z0 425 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 HJURPQ8NCD3 748 aaPredicted RBP16.66■□□□□ 0.26
MUC1-220ENST00000498431 OR2T34Q8NGX1 318 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 SLC35F5Q8WV83 523 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 UBL7Q96S82 380 aaPredicted RBP16.66■□□□□ 0.26
MUC1-220ENST00000498431 NUCKS1Q9H1E3 243 aaKnown RBP16.66■□□□□ 0.26
MUC1-220ENST00000498431 ADAMTS1Q9UHI8 967 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 PTPRQQ9UMZ3 2332 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 ERVW-1Q9UQF0 538 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 RAI2Q9Y5P3 530 aa16.66■□□□□ 0.26
MUC1-220ENST00000498431 LRRC72A6NJI9 287 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 STX10O60499 249 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 LTFP02788 710 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 ASLP04424 464 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
MUC1-220ENST00000498431 SLC8A1P32418 973 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 HNF1BP35680 557 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 EIF2S3P41091 472 aaKnown RBP16.65■□□□□ 0.26
MUC1-220ENST00000498431 PSMD8P48556 350 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 NUMBP49757 651 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 LRMPQ12912 555 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 BNIP3Q12983 259 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 PITRM1Q5JRX3 1037 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 HES3Q5TGS1 186 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms