RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RNF34Q969K3 372 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 MYO19Q96H55 970 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 TKTL2Q9H0I9 626 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 SEPT11Q9NVA2 429 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 INVSQ9Y283 1065 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 SNX10Q9Y5X0 201 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 DMXL1Q9Y485 3027 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 PLXND1Q9Y4D7 1925 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 F5H5T6 163 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 DDX3XO00571 662 aaKnown RBP eCLIP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 NPC1O15118 1278 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 F9P00740 461 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CALB1P05937 261 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 NDUFV2P19404 249 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 BCKDHBP21953 392 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 RFC1P35251 1148 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 PTPN9P43378 593 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 C15orf59Q2T9L4 293 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 MAP7D1Q3KQU3 841 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 LAIR1Q6GTX8 287 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CXorf57Q6NSI4 855 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 OR52K2Q8NGK3 314 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CYB5D2Q8WUJ1 264 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 CENPIQ92674 756 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 TTC17Q96AE7 1141 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 ZC3H10Q96K80 434 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 XPO4Q9C0E2 1151 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 DUSP15Q9H1R2 295 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 SLC6A17Q9H1V8 727 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 TMEM245Q9H330 911 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 WDCPQ9H6R7 721 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 SLC12A6Q9UHW9 1150 aa16.66■□□□□ 0.26
DNMT3A-215ENST00000496570 SIGLEC16A6NMB1 481 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 ALDH1A2O94788 518 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 GYPCP04921 128 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 KRT3P12035 628 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 SKILP12757 684 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 PDGFRAP16234 1089 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 RDXP35241 583 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 P2RY2P41231 377 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 ATP11AP98196 1134 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 PLK5Q496M5 336 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 WDR59Q6PJI9 974 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 CEP68Q76N32 757 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 UCMAQ8WVF2 138 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 MRGPRX3Q96LB0 322 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 PARD6AQ9NPB6 346 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 MBD1Q9UIS9 605 aaPredicted RBP16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 CAPN11Q9UMQ6 739 aa16.65■□□□□ 0.26
DNMT3A-215ENST00000496570 SPAG17Q6Q759 2223 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 A0A1B0GVM2 712 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 TYW5A2RUC4 315 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 TCAF2A6NFQ2 919 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 DRGXA6NNA5 263 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 CNTN5O94779 1100 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 DLDP09622 509 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 C7P10643 843 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 HLA-EP13747 358 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 RRM1P23921 792 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 CSKP41240 450 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 COPAP53621 1224 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 HDAC4P56524 1084 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 RPL7AP62424 266 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 KLHL30Q0D2K2 578 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 MTA1Q13330 715 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 CDH18Q13634 790 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 PITRM1Q5JRX3 1037 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 SDE2Q6IQ49 451 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 FAM131BQ86XD5 332 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 APCDD1Q8J025 514 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 ZNF557Q8N988 423 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 SYN2Q92777 582 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 ALG14Q96F25 216 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 MRGPRX1Q96LB2 322 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 C1orf74Q96LT6 269 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 RPRD1AQ96P16 312 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 SIK2Q9H0K1 926 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 CD93Q9NPY3 652 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 PTPRZ1P23471 2315 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 ITIH6Q6UXX5 1313 aa16.64■□□□□ 0.25
DNMT3A-215ENST00000496570 IGLV3-10A0A075B6K4 115 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 H0Y626 953 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 RETP07949 1114 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 MZF1P28698 734 aaPredicted RBP16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 SDC4P31431 198 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 ZBED6P86452 979 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 OGDHQ02218 1023 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 CDO1Q16878 200 aa16.63■□□□□ 0.25
DNMT3A-215ENST00000496570 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms