RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 OXTRP30559 389 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 WDR45BQ5MNZ6 344 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 DCAF12L1Q5VU92 463 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 OTUD1Q5VV17 481 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-209ENST00000496445 SMYD5Q6GMV2 418 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 CLEC17AQ6ZS10 378 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 PIP4P1Q86T03 277 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 FAM124AQ86V42 546 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 CHSY1Q86X52 802 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 FAM114A1Q8IWE2 563 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 FAM71AQ8IYT1 594 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 LGI2Q8N0V4 545 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 MINDY1Q8N5J2 469 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 ZNF557Q8N988 423 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-209ENST00000496445 CADM4Q8NFZ8 388 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 DNASE2BQ8WZ79 361 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 BTN2A3PQ96KV6 586 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 PRMT1Q99873 361 aaKnown RBP14.78□□□□□ -0.04
VTI1A-209ENST00000496445 FAM204AQ9H8W3 233 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 PLCB1Q9NQ66 1216 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
VTI1A-209ENST00000496445 LMBRD1Q9NUN5 540 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 SUSD2Q9UGT4 822 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 FHOD1Q9Y613 1164 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 CACNA1BQ00975 2339 aa14.78□□□□□ -0.04
VTI1A-209ENST00000496445 ZZEF1O43149 2961 aa14.77□□□□□ -0.04
VTI1A-209ENST00000496445 KCNU1A8MYU2 1149 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 HSF2BPO75031 334 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 GLI1P08151 1106 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 CEACAM1P13688 526 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 CTSOP43234 321 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 RPS14P62263 151 aaKnown RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 SHC2P98077 582 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 PTK2Q05397 1052 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 GRIK2Q13002 908 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 SEMA3BQ13214 749 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 CDH18Q13634 790 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 PLEKHG6Q3KR16 790 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 PITRM1Q5JRX3 1037 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 SYCP2LQ5T4T6 812 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 CIR1Q86X95 450 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 ZCCHC9Q8N567 271 aaKnown RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 NUP58Q9BVL2 599 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 NAA15Q9BXJ9 866 aaKnown RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 ADAM33Q9BZ11 813 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 C6orf106Q9H6K1 298 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-209ENST00000496445 FBRSQ9HAH7 460 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 WASF3Q9UPY6 502 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 SLCO1B1Q9Y6L6 691 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 PCNX2A6NKB5 2137 aa14.77□□□□□ -0.05
VTI1A-209ENST00000496445 SYNJ2BP-COX16A0A087WUM0 186 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 METTL12A8MUP2 240 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 UPK3BL1B0FP48 263 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 UPK3BL2E5RIL1 263 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 OPHN1O60890 802 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 SIN3BO75182 1162 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 DAB1O75553 588 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 GJB3O75712 270 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 ACSL1P33121 698 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 ATXN3P54252 364 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 CDK17Q00537 523 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 HNRNPA1L2Q32P51 320 aaKnown RBP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 EFHC1Q5JVL4 640 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 KLHDC7AQ5VTJ3 777 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 OR6B2Q6IFH4 312 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 C11orf57Q6ZUT1 292 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 ATP6V0D2Q8N8Y2 350 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 C1orf216Q8TAB5 229 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 RSPH9Q9H1X1 276 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 DNAAF2Q9NVR5 837 aaKnown RBP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.76□□□□□ -0.05
VTI1A-209ENST00000496445 DDIT4Q9NX09 232 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 COX16Q9P0S2 106 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 DACH1Q9UI36 760 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 CFAP47Q6ZTR5 3102 aa14.76□□□□□ -0.05
VTI1A-209ENST00000496445 ITIH6Q6UXX5 1313 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 A0A1B0GTW7 788 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 F5H5T6 163 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 H0Y626 953 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 ASLP04424 464 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 SYPP08247 313 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 CD59P13987 128 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 GNSP15586 552 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 CDH5P33151 784 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-209ENST00000496445 KRT9P35527 623 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 NUMBP49757 651 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 IRAK1P51617 712 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 BNC1Q01954 994 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 SLC6A3Q01959 620 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 CENPCQ03188 943 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 RAPGEF1Q13905 1077 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 ARID5BQ14865 1188 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 DRAP1Q14919 205 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-209ENST00000496445 TCP11X2Q5H9J9 407 aa14.75□□□□□ -0.05
VTI1A-209ENST00000496445 ZNF776Q68DI1 518 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-209ENST00000496445 SLC26A9Q7LBE3 791 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms