RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 ACRBPQ8NEB7 543 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 MCRS1Q96EZ8 462 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 TMEM41AQ96HV5 264 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 REXO5Q96IC2 774 aaKnown RBP3.61□□□□□ -1.83
CMC1-211ENST00000495428 MARK4Q96L34 752 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 PRPF18Q99633 342 aaKnown RBP3.61□□□□□ -1.83
CMC1-211ENST00000495428 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 TP63Q9H3D4 680 aaPredicted RBP3.61□□□□□ -1.83
CMC1-211ENST00000495428 SFXN1Q9H9B4 322 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 ARFGAP3Q9NP61 516 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 FZD3Q9NPG1 666 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 ZBTB1Q9Y2K1 713 aa3.61□□□□□ -1.83
CMC1-211ENST00000495428 IGKV2D-30A0A075B6S6 120 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 CYP3A7-CYP3A51PA0A087WV96 503 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 FAM90A8PA6NJQ4 464 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 RHODO00212 210 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 HMGB1P09429 215 aaKnown RBP3.6□□□□□ -1.83
CMC1-211ENST00000495428 FAM90A13PP0C7W8 464 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 FAM90A24PP0C7X0 464 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 CYP3A7P24462 503 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 CIITAP33076 1130 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 PPM1AP35813 382 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 THBS3P49746 956 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 PTGR1Q14914 329 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 ZNF569Q5MCW4 686 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 TTC39AQ5SRH9 613 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 C6orf10Q5SRN2 563 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 TTLL5Q6EMB2 1281 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 NOL8Q76FK4 1167 aaKnown RBP3.6□□□□□ -1.83
CMC1-211ENST00000495428 PELI3Q8N2H9 469 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 CENPIQ92674 756 aaPredicted RBP3.6□□□□□ -1.83
CMC1-211ENST00000495428 RSC1A1Q92681 617 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 EME1Q96AY2 570 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 LYZL4Q96KX0 146 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 ELAC2Q9BQ52 826 aaKnown RBP3.6□□□□□ -1.83
CMC1-211ENST00000495428 CCDC134Q9H6E4 229 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 AAMDCQ9H7C9 122 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 MLXIPQ9HAP2 919 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 NLRC4Q9NPP4 1024 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 ANAPC4Q9UJX5 808 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 LAMP3Q9UQV4 416 aa3.6□□□□□ -1.83
CMC1-211ENST00000495428 CCDC194A0A1B0GVG4 234 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 GOLGA6L3A6NEY3 463 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 KIF28PB7ZC32 967 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 DNPH1O43598 174 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 ASNA1O43681 348 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 NFATC1O95644 943 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 ALDOCP09972 364 aaKnown RBP3.59□□□□□ -1.83
CMC1-211ENST00000495428 AKT1P31749 480 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 GRK5P34947 590 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 POLD2P49005 469 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 HTR6P50406 440 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 NANOS2P60321 138 aaKnown RBP3.59□□□□□ -1.83
CMC1-211ENST00000495428 RBM6P78332 1123 aaKnown RBP3.59□□□□□ -1.83
CMC1-211ENST00000495428 SHC2P98077 582 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 STARD3Q14849 445 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 ZNF549Q6P9A3 640 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 TMEM199Q8N511 208 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 ATP2A3Q93084 1043 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 TASP1Q9H6P5 420 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 TXNRD2Q9NNW7 524 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.59□□□□□ -1.83
CMC1-211ENST00000495428 CDC23Q9UJX2 597 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 RAB21Q9UL25 225 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 TRPC5Q9UL62 973 aaPredicted RBP3.59□□□□□ -1.83
CMC1-211ENST00000495428 SLC12A4Q9UP95 1085 aa3.59□□□□□ -1.83
CMC1-211ENST00000495428 LMTK3Q96Q04 1460 aa3.59□□□□□ -1.84
CMC1-211ENST00000495428 AQP12BA6NM10 295 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 A6NNC1 897 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 FOXO6A8MYZ6 492 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 SPTLC2O15270 562 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 FFAR2O15552 330 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 SMAD6O43541 496 aaKnown RBP3.58□□□□□ -1.84
CMC1-211ENST00000495428 PLIN1O60240 522 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 LARGE1O95461 756 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 IFIT2P09913 472 aaKnown RBP3.58□□□□□ -1.84
CMC1-211ENST00000495428 CHRNB1P11230 501 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 CCKBRP32239 447 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 PGGT1BP53609 377 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 FAM3BP58499 235 aaPredicted RBP3.58□□□□□ -1.84
CMC1-211ENST00000495428 GAD2Q05329 585 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 PPATQ06203 517 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 SF3A3Q12874 501 aaKnown RBP eCLIP3.58□□□□□ -1.84
CMC1-211ENST00000495428 PTK2BQ14289 1009 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 SPARCL1Q14515 664 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 TRIM60Q495X7 471 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 C10orf76Q5T2E6 689 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 ASPHD1Q5U4P2 390 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 NUGGCQ68CJ6 796 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 ERAP2Q6P179 960 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 CRELD2Q6UXH1 353 aaPredicted RBP3.58□□□□□ -1.84
CMC1-211ENST00000495428 CYB5R4Q7L1T6 521 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 FAM71BQ8TC56 605 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 TMEM174Q8WUU8 243 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 OSBPL5Q9H0X9 879 aaPredicted RBP3.58□□□□□ -1.84
CMC1-211ENST00000495428 SPAG4Q9NPE6 437 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 ZNF580Q9UK33 172 aa3.58□□□□□ -1.84
CMC1-211ENST00000495428 CNTN6Q9UQ52 1028 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms