RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ANKRD62A6NC57 917 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PAGE1O75459 146 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 ACADMP11310 421 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 UNGP13051 313 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 BCKDHBP21953 392 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 DHPSP49366 369 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 CXCR3P49682 368 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 CENPCQ03188 943 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 AUHQ13825 339 aaKnown RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 CLEC16AQ2KHT3 1053 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 RNF219Q5W0B1 726 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 LRRC31Q6UY01 552 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PRR23CQ6ZRP0 262 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 CYP2U1Q7Z449 544 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 WFDC5Q8TCV5 224 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PRCCQ92733 491 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 ERLEC1Q96DZ1 483 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 TBCBQ99426 244 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PRMT1Q99873 361 aaKnown RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 SIK2Q9H0K1 926 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 FBRSQ9HAH7 460 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 CD248Q9HCU0 757 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PARD6AQ9NPB6 346 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 METTL5Q9NRN9 209 aaKnown RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 ARHGEF38Q9NXL2 777 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 SUN2Q9UH99 717 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 TMEM59LQ9UK28 342 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 HS3ST4Q9Y661 456 aa18.22■□□□□ 0.51
HDAC4-211ENST00000494800 PTPRZ1P23471 2315 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-211ENST00000494800 OTOGLQ3ZCN5 2332 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 NDUFS2O75306 463 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 ZNF806P0C7X5 589 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 DESP17661 470 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 TGM1P22735 817 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 PRKCHP24723 683 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 SDC4P31431 198 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 FLT3P36888 993 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 CSKP41240 450 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 RPL6Q02878 288 aaKnown RBP18.21■□□□□ 0.51
HDAC4-211ENST00000494800 PITRM1Q5JRX3 1037 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 FBXL22Q6P050 247 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
HDAC4-211ENST00000494800 LUZP1Q86V48 1076 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-211ENST00000494800 TMPRSS6Q8IU80 811 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 CCAR2Q8N163 923 aaKnown RBP18.21■□□□□ 0.51
HDAC4-211ENST00000494800 KDM1BQ8NB78 822 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 TTC17Q96AE7 1141 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 MYEOVQ96EZ4 313 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 SIPA1Q96FS4 1042 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 SELENOOQ9BVL4 669 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 TMEM245Q9H330 911 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 CDV3Q9UKY7 258 aaKnown RBP18.21■□□□□ 0.51
HDAC4-211ENST00000494800 VANGL2Q9ULK5 521 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 CYP8B1Q9UNU6 501 aa18.21■□□□□ 0.51
HDAC4-211ENST00000494800 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 BCLAF3A2AJT9 711 aaKnown RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 CLDN11O75508 207 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 SRPRAP08240 638 aaKnown RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 KRT3P12035 628 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 PDGFRAP16234 1089 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 TNFAIP3P21580 790 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 NNMTP40261 264 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 SULT2A1Q06520 285 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 ZNF177Q13360 481 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 NR1I3Q14994 352 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 ASIC2Q16515 512 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 PTPRNQ16849 979 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 ARL13BQ3SXY8 428 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 AASDHQ4L235 1098 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 FSCBQ5H9T9 825 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 SFMBT2Q5VUG0 894 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 OTUD1Q5VV17 481 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 OR2T3Q8NH03 318 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 C1orf74Q96LT6 269 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 PCDHB18PQ96TA0 734 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 NUP58Q9BVL2 599 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 EDEM3Q9BZQ6 932 aa18.2■□□□□ 0.5
HDAC4-211ENST00000494800 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.2■□□□□ 0.5
HDAC4-211ENST00000494800 EP300Q09472 2414 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-211ENST00000494800 GVINP1Q7Z2Y8 2422 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 IGHV1OR15-9A0A0B4J2B8 117 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 LRRC53A6NM62 1247 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 ADCY5O95622 1261 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 TPM3P06753 285 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 HLA-EP13747 358 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 OXTRP30559 389 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 CDH4P55283 916 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 GSCP56915 257 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-211ENST00000494800 ATP11AP98196 1134 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 FANCCQ00597 558 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 ECT2LQ008S8 904 aa18.19■□□□□ 0.5
HDAC4-211ENST00000494800 CAMK2GQ13555 558 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms