RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RPS24P62847 133 aaKnown RBP24.09■■□□□ 1.45
COL27A1-208ENST00000494780 SFSWAPQ12872 951 aaKnown RBP24.09■■□□□ 1.45
COL27A1-208ENST00000494780 MEA1Q16626 185 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 HNRNPA1L2Q32P51 320 aaKnown RBP24.09■■□□□ 1.45
COL27A1-208ENST00000494780 MS4A13Q5J8X5 152 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 USP30Q70CQ3 517 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 SLCO6A1Q86UG4 719 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 TRIM59Q8IWR1 403 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 CARNMT1Q8N4J0 409 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 FAM149B1Q96BN6 582 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 KREMEN1Q96MU8 473 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 CDC6Q99741 560 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 ST7Q9NRC1 585 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 INTS6Q9UL03 887 aaKnown RBP24.09■■□□□ 1.45
COL27A1-208ENST00000494780 ANKRD6Q9Y2G4 727 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 SNX11Q9Y5W9 270 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 RNASEH1O60930 286 aaKnown RBP24.08■■□□□ 1.45
COL27A1-208ENST00000494780 FSBPO95073 299 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 CAPNS1P04632 268 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 CSKP41240 450 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 MARSP56192 900 aaKnown RBP24.08■■□□□ 1.45
COL27A1-208ENST00000494780 CDH18Q13634 790 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 MORC3Q14149 939 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 ARID5BQ14865 1188 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 CCNI2Q6ZMN8 369 aaPredicted RBP24.08■■□□□ 1.45
COL27A1-208ENST00000494780 RHBDD1Q8TEB9 315 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 STK32AQ8WU08 396 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 MYEOVQ96EZ4 313 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 MRGPRX3Q96LB0 322 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 NUCKS1Q9H1E3 243 aaKnown RBP24.08■■□□□ 1.45
COL27A1-208ENST00000494780 PABPC3Q9H361 631 aaKnown RBP24.08■■□□□ 1.45
COL27A1-208ENST00000494780 MTG2Q9H4K7 406 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 CTNND2Q9UQB3 1225 aa24.08■■□□□ 1.45
COL27A1-208ENST00000494780 SIN3BO75182 1162 aa24.07■■□□□ 1.44
COL27A1-208ENST00000494780 AFPP02771 609 aaKnown RBP24.07■■□□□ 1.44
COL27A1-208ENST00000494780 TAC4Q86UU9 113 aa24.07■■□□□ 1.44
COL27A1-208ENST00000494780 SLC4A5Q9BY07 1137 aa24.07■■□□□ 1.44
COL27A1-208ENST00000494780 INTS2Q9H0H0 1204 aaKnown RBP24.07■■□□□ 1.44
COL27A1-208ENST00000494780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.07■■□□□ 1.44
COL27A1-208ENST00000494780 ZZEF1O43149 2961 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 TARSL2A2RTX5 802 aaKnown RBP24.06■■□□□ 1.44
COL27A1-208ENST00000494780 CAPN9O14815 690 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 MED7O43513 233 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 LUC7L3O95232 432 aaKnown RBP24.06■■□□□ 1.44
COL27A1-208ENST00000494780 MOCS3O95396 460 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 MOCS2O96007 188 aaPredicted RBP24.06■■□□□ 1.44
COL27A1-208ENST00000494780 APOEP02649 317 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 SRPRAP08240 638 aaKnown RBP24.06■■□□□ 1.44
COL27A1-208ENST00000494780 KRT5P13647 590 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 SCAPQ12770 1279 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 DCAF6Q58WW2 860 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 FSCBQ5H9T9 825 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 PITRM1Q5JRX3 1037 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 SYPL2Q5VXT5 272 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 KIAA0895LQ68EN5 471 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 DENND1BQ6P3S1 775 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 PROSER1Q86XN7 944 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 ADAM32Q8TC27 787 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 GANCQ8TET4 914 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 IGSF8Q969P0 613 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 ORAI3Q9BRQ5 295 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 FBXL12Q9NXK8 326 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 ERVW-1Q9UQF0 538 aa24.06■■□□□ 1.44
COL27A1-208ENST00000494780 TAF4O00268 1085 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 IGHV4-34P06331 123 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 PAK1Q13153 545 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 CST6Q15828 149 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 TMEM110Q86TL2 294 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 DHX40Q8IX18 779 aaKnown RBP24.05■■□□□ 1.44
COL27A1-208ENST00000494780 CFAP52Q8N1V2 620 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 MED15Q96RN5 788 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 POPDC2Q9HBU9 364 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 UBE2TQ9NPD8 197 aaPredicted RBP24.05■■□□□ 1.44
COL27A1-208ENST00000494780 KNL1Q8NG31 2342 aa24.05■■□□□ 1.44
COL27A1-208ENST00000494780 PAPSS1O43252 624 aaPredicted RBP24.04■■□□□ 1.44
COL27A1-208ENST00000494780 PCDHGA12O60330 932 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 DKK1O94907 266 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 LETM1O95202 739 aaPredicted RBP24.04■■□□□ 1.44
COL27A1-208ENST00000494780 CTSKP43235 329 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 CCT8P50990 548 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 STX17P56962 302 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 C9orf64Q5T6V5 341 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 MMS22LQ6ZRQ5 1243 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 ENOSF1Q7L5Y1 443 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 ADAT2Q7Z6V5 191 aaKnown RBP24.04■■□□□ 1.44
COL27A1-208ENST00000494780 LGI2Q8N0V4 545 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 ZNF606Q8WXB4 792 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 BTN2A3PQ96KV6 586 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 SRRTQ9BXP5 876 aaKnown RBP24.04■■□□□ 1.44
COL27A1-208ENST00000494780 TOR4AQ9NXH8 423 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 TJP2Q9UDY2 1190 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 XPO7Q9UIA9 1087 aaKnown RBP24.04■■□□□ 1.44
COL27A1-208ENST00000494780 BTBD3Q9Y2F9 522 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 ITIH6Q6UXX5 1313 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 ZFYVE26Q68DK2 2539 aa24.04■■□□□ 1.44
COL27A1-208ENST00000494780 EDDM13A0A1B0GTR0 161 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 E5RJQ4 531 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 BIN1O00499 593 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 DFNA5O60443 496 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 ATXN1LP0C7T5 689 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms